Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04568 and RBAM_028170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence pep-align/BSNT_04568___yuaC.1.9828.seq
# -bsequence pep-align/RBAM_028170___yuaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04568___yuaC-RBAM_028170___yuaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04568___yuaC-RBAM_028170___yuaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04568___yuaC
# 2: RBAM_028170___yuaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity: 158/184 (85.9%)
# Similarity: 169/184 (91.8%)
# Gaps: 4/184 ( 2.2%)
# Score: 814.0
#
#
#=======================================
BSNT_04568___ 1 MDENPEFAAIEQARDLVIDSIAETMDLYGITRSVGILYGTMYMRDEMTLD 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_028170__ 1 MDENPEFAAIEQARDLVIDSIAETMDLYGITRSVGILYGTMYMRDEMTLD 50
BSNT_04568___ 51 EMREELQMSKPSMSTGVKKLQDLNVVKKTFHRGIRKHTFVAEKDFFKFFT 100
|||||||||||||||||||||||||||||||||.||||||||||||.|||
RBAM_028170__ 51 EMREELQMSKPSMSTGVKKLQDLNVVKKTFHRGTRKHTFVAEKDFFTFFT 100
BSNT_04568___ 101 NFFPPKWEREVQVNVAAIEEAQADLQKVLCKEDLDEDIKNEALQLYDQLE 150
|||||||:||||||::|||:||||||.||..|:.:.:::.||.|||||||
RBAM_028170__ 101 NFFPPKWDREVQVNLSAIEQAQADLQSVLLAEEGNAELQEEARQLYDQLE 150
BSNT_04568___ 151 SSKAYYDWLKRLAESVQTGEIFKFIPIETK---- 180
||||||.||||||:|||:|||||||||||.
RBAM_028170__ 151 SSKAYYHWLKRLADSVQSGEIFKFIPIETDEKNA 184
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