Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02034 and RBAM_028230

See DNA alignment / Visit BSNT_02034 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_02034___yjcN.1.9828.seq
#    -bsequence pep-align/RBAM_028230___yjcN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02034___yjcN-RBAM_028230___yjcN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02034___yjcN-RBAM_028230___yjcN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02034___yjcN
# 2: RBAM_028230___yjcN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      76/110 (69.1%)
# Similarity:    90/110 (81.8%)
# Gaps:           5/110 ( 4.5%)
# Score: 423.0
# 
#
#=======================================

BSNT_02034___      1 MEKKMKKKTSFILSILAALIVILIALPVLSPVVFTGASEKGAIRHEIYKR     50
                         ||||...:|::.|||.::|.|||.|||:|||.|||||||||:|||:
RBAM_028230__      1 ----MKKKIYLLLTLSAALALLLTALPALSPIVFTSASEKGAIRHDIYKK     46

BSNT_02034___     51 GYPYQSYFAVLHK-EGDNESGNLYYVNWLDWKDKTGQTPHLCYSKKSSDG     99
                     |||||||||:|.| ||..|:||||||||.:|||.||||||:|||||||:|
RBAM_028230__     47 GYPYQSYFAILRKEEGGGEAGNLYYVNWFNWKDDTGQTPHVCYSKKSSEG     96

BSNT_02034___    100 KYKVDCGTGA    109
                     :|||.||||.
RBAM_028230__     97 EYKVSCGTGP    106


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