Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
Amino acid alignment: BSNT_04607 and RBAM_028370

See DNA alignment / Visit BSNT_04607 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence pep-align/BSNT_04607___yugT.1.9828.seq
#    -bsequence pep-align/RBAM_028370___yugT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04607___yugT-RBAM_028370___yugT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04607___yugT-RBAM_028370___yugT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04607___yugT
# 2: RBAM_028370___yugT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 554
# Identity:     419/554 (75.6%)
# Similarity:   479/554 (86.5%)
# Gaps:           2/554 ( 0.4%)
# Score: 2362.0
# 
#
#=======================================

BSNT_04607___      1 MKKAWWKEAVVYQIYPRSFKDSNGDGIGDIQGIRSKLSYIKELGADVIWI     50
                     ||..|||.|.|||||||||.|||||||||:.|||:||.|||||||||||:
RBAM_028370__      1 MKTDWWKTAAVYQIYPRSFMDSNGDGIGDMNGIRAKLHYIKELGADVIWL     50

BSNT_04607___     51 CPLYDSPNADNGYDIRDYQNILSEFGTMEDFDELLGDIHDLGMKLIMDLV    100
                     ||::|||.||||||||:|:.|..|||||||||.||.|:|.||||||:|||
RBAM_028370__     51 CPVFDSPGADNGYDIRNYKQIAGEFGTMEDFDRLLADVHALGMKLIIDLV    100

BSNT_04607___    101 VNHTSDEHPWFIESRSSIHSEKRDWYIWKDGKNGKAPNNWESIFGGPAWE    150
                     :|||||||||||||||:..|||||||||:||||||.||||||||||.|||
RBAM_028370__    101 INHTSDEHPWFIESRSAKDSEKRDWYIWRDGKNGKEPNNWESIFGGSAWE    150

BSNT_04607___    151 YDQETSQYYLHLFDKKQPDLNWENEQVRNAVYDMINWWLDKGIDGFRVDA    200
                     |||||.|||||||||||||||||||.:|.:||:|:.||||||||||||||
RBAM_028370__    151 YDQETGQYYLHLFDKKQPDLNWENEAMRQSVYEMVRWWLDKGIDGFRVDA    200

BSNT_04607___    201 ITHIKKKEGLPDMPNPKGLDYVPSFPYHMNADGIMDLLTELKENTFSRYP    250
                     |:||||||||||||||.||.||||||||||.:||||||.|||..||||||
RBAM_028370__    201 ISHIKKKEGLPDMPNPDGLPYVPSFPYHMNGEGIMDLLRELKRETFSRYP    250

BSNT_04607___    251 IMTVGEANGVAAKEAADWAGEKNGIFSMIFQFEHLGLWDVEINESIDIVA    300
                     ||||||||||||.||||||||::|:|.||||||||||||.|.::||.|.|
RBAM_028370__    251 IMTVGEANGVAAWEAADWAGEEHGVFQMIFQFEHLGLWDTEDDQSISIPA    300

BSNT_04607___    301 FKRILTDWQDSLEGIGWNALFMENHDQPRSVSVWGDDGVYLKESAKALSA    350
                     .||:|:.||:||||.|||||||||||||||||||||:. :|.||||||:|
RBAM_028370__    301 LKRVLSGWQNSLEGKGWNALFMENHDQPRSVSVWGDER-FLTESAKALAA    349

BSNT_04607___    351 VYFLMKGTPFIYQGQELGMTNVAFPSIEDYDDVAMKRLYETKTAKGTSHE    400
                     :|.|||||||||||||||||||:|||||||||.|||.|||.:|::|..||
RBAM_028370__    350 MYMLMKGTPFIYQGQELGMTNVSFPSIEDYDDAAMKYLYEKETSRGVPHE    399

BSNT_04607___    401 DVMKIVWKKGRDNSRTPMQWNAGPYAGFSEAKPWIGINDNYKWLNAEAQK    450
                     .||||:||||||||||||||:.....|||:|.||:|:|.|:.||||.:|.
RBAM_028370__    400 KVMKIIWKKGRDNSRTPMQWSDEANGGFSDASPWLGVNPNHTWLNAASQM    449

BSNT_04607___    451 NDKTSVYHFYKSLIKLRQTYDVFINGTYELILPEDQQIFAYLRKNESHTA    500
                     .|:|||||||:.|:.||:.:.|.|:|||||:||.|:||:||||||.:.||
RBAM_028370__    450 EDETSVYHFYRRLLALRKEHSVLISGTYELLLPNDRQIYAYLRKNGTKTA    499

BSNT_04607___    501 LIAANLTGTPALFRHSGLPLSSDALVLSNIETEPHKHMTSVLLKPYEARI    550
                     ||..||:.||||:||.|.||.||:|||:|:|||.|:|:||.||||||||:
RBAM_028370__    500 LIITNLSRTPALYRHPGYPLDSDSLVLANVETEAHRHVTSFLLKPYEARV    549

BSNT_04607___    551 YLWC    554
                     |:| 
RBAM_028370__    550 YIW-    552


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04607 and RBAM_028370

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
