Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04614 and RBAM_028400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence pep-align/BSNT_04614.1.9828.seq
# -bsequence pep-align/RBAM_028400___yugO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04614-RBAM_028400___yugO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04614-RBAM_028400___yugO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04614
# 2: RBAM_028400___yugO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 328
# Identity: 237/328 (72.3%)
# Similarity: 292/328 (89.0%)
# Gaps: 0/328 ( 0.0%)
# Score: 1280.0
#
#
#=======================================
BSNT_04614 1 MKSNRIFISWLRWPLFIRIGVIILCLILLFGQIIYILEPKQFTSVFEGIW 50
|||||||||||||||::|||:||:.|||||||:||:||||||||||||||
RBAM_028400__ 1 MKSNRIFISWLRWPLYVRIGLIIIALILLFGQLIYMLEPKQFTSVFEGIW 50
BSNT_04614 51 WAVVTVSTVGYGDYVPHTPLGQAAGILLILSGASFVTAYFATLSAAAFSR 100
|||:||:|||||||||.|||||.||::|:|||||||||||||||:|.||:
RBAM_028400__ 51 WAVITVATVGYGDYVPQTPLGQIAGMVLVLSGASFVTAYFATLSSAVFSK 100
BSNT_04614 101 QHRYIEGKVAYKGRDHIILIGWNEKTNRLLKDLQLAAPSKTVVLIDESLT 150
||||:|||||:||:.|:||||||||::.|||:||..||||||||||:||.
RBAM_028400__ 101 QHRYVEGKVAFKGKGHVILIGWNEKSHMLLKELQHIAPSKTVVLIDDSLR 150
BSNT_04614 151 EGPLIENVHFIRGHAADDGTLKRANITEAESVMITADQYKSETDADMLSV 200
||||||||||||||||||.||.:||||||::|::||||.|:|::||||||
RBAM_028400__ 151 EGPLIENVHFIRGHAADDSTLNKANITEADTVILTADQQKNESEADMLSV 200
BSNT_04614 201 LTLLSVKGLNPLAYCIVEILTDRFVTNAERAGANQIIGTSEFISRAMLQH 250
||||::|||:|..||||||||:|:|.||||||||:|:.||...||.|.:|
RBAM_028400__ 201 LTLLAIKGLHPSVYCIVEILTERYVKNAERAGANKILCTSRLSSRVMFEH 250
BSNT_04614 251 YQVKLRPSKQQIGIKLTLDQHVELLAVPDELKGAAYKTCVLYFLDHNTTI 300
|:|||:.:|.|....|||::.|.::.||:||||::|..|.||:|..||||
RBAM_028400__ 251 YRVKLQLAKPQTLSDLTLEKKVRIIPVPEELKGSSYHDCALYYLKRNTTI 300
BSNT_04614 301 IGVQKKEGPMLSPPLTYKVLETDQFLAI 328
||:||:|||||:|||:|:||:||.|||:
RBAM_028400__ 301 IGIQKEEGPMLTPPLSYQVLDTDLFLAL 328
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