Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04651 and RBAM_028680

See DNA alignment / Visit BSNT_04651 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence pep-align/BSNT_04651___mrpA.1.9828.seq
#    -bsequence pep-align/RBAM_028680___mrpA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04651___mrpA-RBAM_028680___mrpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04651___mrpA-RBAM_028680___mrpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04651___mrpA
# 2: RBAM_028680___mrpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 801
# Identity:     644/801 (80.4%)
# Similarity:   726/801 (90.6%)
# Gaps:           1/801 ( 0.1%)
# Score: 3406.0
# 
#
#=======================================

BSNT_04651___      1 MQLLHLAILSPFLFAFIIPFLAKYAKRVHTGWFVLILPVLLFIYFLPMIR     50
                     |||||.|||:||||.||:|||.|..|:|||||||||:||:||:||:..:.
RBAM_028680__      1 MQLLHFAILAPFLFTFIVPFLYKRVKQVHTGWFVLIVPVVLFVYFISKLP     50

BSNT_04651___     51 MTQSGETLRSVLEWIPSLGINFTVYIDGLGLLFALLITGIGSLVTLYSIF    100
                     :|.:|||:|...|||||||||:|||:||||||||||||||||||||||||
RBAM_028680__     51 VTMAGETVRYAAEWIPSLGINYTVYLDGLGLLFALLITGIGSLVTLYSIF    100

BSNT_04651___    101 YLSKEKEQLGPFYVYLLMFMGAMLGVVLVDNVMVLYMFWELTSLSSFLLI    150
                     ||||:||:||||||||||||||||||||||||:|||||||||||||||||
RBAM_028680__    101 YLSKDKEKLGPFYVYLLMFMGAMLGVVLVDNVIVLYMFWELTSLSSFLLI    150

BSNT_04651___    151 GYWYKREKSRYGAAKSLLITVSGGLCMLGGFILLYLITDSFSIREMVHQV    200
                     |||:||:||||||.|||||||.||||||||||||||:||||||||||:||
RBAM_028680__    151 GYWHKRKKSRYGAEKSLLITVGGGLCMLGGFILLYLMTDSFSIREMVNQV    200

BSNT_04651___    201 QLIAGHELFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSA    250
                     .:||||..|||||:|:||||||||||||||||||||||||||||||||||
RBAM_028680__    201 HIIAGHPFFIPAMVLLLLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSA    250

BSNT_04651___    251 TMVKAGIYVIARFSPIFAFSAQWFWIVSLVGLFTMVWGSFHAVKQTDLKS    300
                     |||||||||||||||:||||..|||.|:.|||.||||.||:|:||||||:
RBAM_028680__    251 TMVKAGIYVIARFSPVFAFSPVWFWTVASVGLITMVWASFNAMKQTDLKA    300

BSNT_04651___    301 ILAFSTVSQLGMIISMLGVSAAALHYGHTEYYTVAAMAAIFHLINHATFK    350
                     |||||||||||||:||||..||||||.|:||:|.|..||:||||||||||
RBAM_028680__    301 ILAFSTVSQLGMIVSMLGAGAAALHYQHSEYFTAAVTAAVFHLINHATFK    350

BSNT_04651___    351 GSLFMAVGIIDHETGTRDIRKLGGLMAIMPITFTISLIGTFSMAGLPPFN    400
                     ||||||||||||||||||||:||||||:||:|||:|||||||||||||||
RBAM_028680__    351 GSLFMAVGIIDHETGTRDIRRLGGLMALMPVTFTVSLIGTFSMAGLPPFN    400

BSNT_04651___    401 GFLSKEMFFTSMLRVTHFDLFNVQTWGVLFPLFAWIGSVFTFIYSMKLLF    450
                     ||||||||||||||:.|.|:|::.|||||||:.|||||||||||||||.|
RBAM_028680__    401 GFLSKEMFFTSMLRIAHADIFSLDTWGVLFPVLAWIGSVFTFIYSMKLFF    450

BSNT_04651___    451 KTFRGNYQPEQLEKPAHEAPVGMLVPPVILVALAVSLFFFPNILSYSLIE    500
                     :||.|..:|:||||..||||:|||:.||||.|.||||||.||:|||||||
RBAM_028680__    451 RTFSGARKPDQLEKTPHEAPLGMLISPVILAACAVSLFFAPNVLSYSLIE    500

BSNT_04651___    501 PAMNSIYPTLLAGHEKFHVHISQWHGVTTELLMTAGIVVIGTIGYLSLNK    550
                     ||||||||.||.|.:.||||||||||||.||:||.||:::|||||::|:|
RBAM_028680__    501 PAMNSIYPALLTGGDTFHVHISQWHGVTAELMMTLGIIIVGTIGYVTLSK    550

BSNT_04651___    551 WKGIYKLFPSKLTLNRLYDKLLTLMEKGSYRITKQYMTGFLRDYLLYIFA    600
                     |:.:|.|||.|||||:|||.:...|||.||::|..|||||||||||||||
RBAM_028680__    551 WERLYGLFPKKLTLNKLYDAVTGSMEKRSYQLTSSYMTGFLRDYLLYIFA    600

BSNT_04651___    601 GFIILIGGAFAIKGGFSFKTEGMAKIGVYEIILTLVMISATVATVFARSR    650
                     .||||||.||..|||||...:|||:||:|||:|:|||:|||:|||||:||
RBAM_028680__    601 AFIILIGTAFVTKGGFSMTAKGMAEIGLYEIVLSLVMVSATIATVFAKSR    650

BSNT_04651___    651 LTAIIALGVVGYTLALFFVIFRAPDLALTQLVIETISVALFLLCFYHLPK    700
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
RBAM_028680__    651 LTAIISLGVVGYTLALFFVIFRAPDLALTQLVIETISVALFLLCFYHLPK    700

BSNT_04651___    701 LRLKTKTRTFRMTNFIISLGVGIIVTLLGIASSSQRTKDSIASFFVKHSH    750
                     :|.|.|||||||||||||||||:|||:|||||||::|||||:|||..:||
RBAM_028680__    701 MRRKKKTRTFRMTNFIISLGVGVIVTMLGIASSSEKTKDSISSFFTAYSH    750

BSNT_04651___    751 DLGGGDNVVNVILVDFRGFDTMFEITVLTIAALGIYSMIKTKVKEEGKSG    800
                     .||||:|:||||||||||||||||||||:|||||||.||:|||||||:..
RBAM_028680__    751 KLGGGNNIVNVILVDFRGFDTMFEITVLSIAALGIYGMIRTKVKEEGEER    800

BSNT_04651___    801 E    801
                      
RBAM_028680__    800 -    800


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