Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04670 and RBAM_028820

See DNA alignment / Visit BSNT_04670 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04670___yuxH.1.9828.seq
#    -bsequence pep-align/RBAM_028820___yuxH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04670___yuxH-RBAM_028820___yuxH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04670___yuxH-RBAM_028820___yuxH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04670___yuxH
# 2: RBAM_028820___yuxH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity:     315/410 (76.8%)
# Similarity:   372/410 (90.7%)
# Gaps:           4/410 ( 1.0%)
# Score: 1665.0
# 
#
#=======================================

BSNT_04670___      1 MRVFVARQPIFNRKEQVVAYELLYRESEENVYSAKDGDQATTDLVINSFL     50
                     |:|||||||||||.||||||||||||||||.|||.|||:|||||:||||:
RBAM_028820__      1 MKVFVARQPIFNRNEQVVAYELLYRESEENRYSAADGDKATTDLIINSFI     50

BSNT_04670___     51 NIGIEKLTEGKRCFVNFTESLMFSNLPTSFNPKQLVIEILEDIPITPALI    100
                     ||||||||||||||||||||||||:|||||:|.||:||||||||||||||
RBAM_028820__     51 NIGIEKLTEGKRCFVNFTESLMFSDLPTSFDPDQLIIEILEDIPITPALI    100

BSNT_04670___    101 SRCKELKKMGYMLALDDFYAINPQDEDLLEKLMSYIDILKIDFLKTTRME    150
                     |||::|||:||.|||||||||||::|:|:|:||.||||||||||:::|:|
RBAM_028820__    101 SRCRQLKKLGYTLALDDFYAINPENEELVEQLMKYIDILKIDFLQSSRLE    150

BSNT_04670___    151 RRTILQTYGCRGLIFLAEKVETRKEYKQAVQDGFQLFQGYFFSEPRIISG    200
                     |:.|:|||.|:.||:|||||||||:||||..|||.|||||||||||:|||
RBAM_028820__    151 RKKIIQTYSCKSLIYLAEKVETRKDYKQAAIDGFHLFQGYFFSEPRVISG    200

BSNT_04670___    201 HDLSTHFYSYYELLNELSKEQPNIKRVTEYIERDLSLSYQILKFLNSSHS    250
                     :||:.||:|||:||:||:.:||||:|||||||||:|||||||:|||.|.:
RBAM_028820__    201 NDLTFHFHSYYQLLSELNNDQPNIQRVTEYIERDVSLSYQILRFLNGSQT    250

BSNT_04670___    251 RLSQKIESIQQAIMLLGFNEIKRWIYILSFKDLSRKGHSSKHEIIKISLI    300
                     ||.:||:|||||||:||.|||||.||||||:||:.|.|||:.||||||||
RBAM_028820__    251 RLKKKIDSIQQAIMMLGLNEIKRLIYILSFRDLTAKSHSSQKEIIKISLI    300

BSNT_04670___    301 RAKLCELLARKTFRPQPASYMLIGMFSLIDTLLHRGIEEIVQELPLKDEV    350
                     |||||||||::|.||||:|||||||||||||||||.:|:|::||||.|||
RBAM_028820__    301 RAKLCELLAKRTGRPQPSSYMLIGMFSLIDTLLHRELEDIIKELPLIDEV    350

BSNT_04670___    351 GQALLGHQNDYYQMLELVKLIESNNWDTCSELGNQLDKEEAYECYLEALE    400
                     ||||||::||||:||..||.||.|||| |.|.|.:|:|||||||||:|:|
RBAM_028820__    351 GQALLGYENDYYKMLAFVKAIECNNWD-CDEWGKELNKEEAYECYLQAIE    399

BSNT_04670___    401 WCHNL-MDAK    409
                     ||..| :|  
RBAM_028820__    400 WCRQLIVD--    407


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