Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04672 and RBAM_028840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence pep-align/BSNT_04672___yueJ.1.9828.seq
# -bsequence pep-align/RBAM_028840___yueJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04672___yueJ-RBAM_028840___yueJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04672___yueJ-RBAM_028840___yueJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04672___yueJ
# 2: RBAM_028840___yueJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 183
# Identity: 146/183 (79.8%)
# Similarity: 159/183 (86.9%)
# Gaps: 0/183 ( 0.0%)
# Score: 792.0
#
#
#=======================================
BSNT_04672___ 1 MKKALICIDYTNDFVASDGKLTCGEPGRMIEEAIVNLTEEFITNGDYVVL 50
||||.|||||||||.|.:|.||||||.|.||:.||:||:.||.||||||.
RBAM_028840__ 1 MKKAFICIDYTNDFAAENGALTCGEPARQIEDTIVSLTQAFIENGDYVVF 50
BSNT_04672___ 51 AVDSHAEGDQYHPETRLFPPHNIKGTEGKDLYGKLLPLYQKHEHEPNVYY 100
|||||...|.:||||||||||||.|||||:|||:|.|||:||:|..||.|
RBAM_028840__ 51 AVDSHDADDDFHPETRLFPPHNINGTEGKELYGRLSPLYEKHKHAKNVNY 100
BSNT_04672___ 101 MEKTRYSAFAGTDLELKLRERQIGELHLAGVCTDICVLHTAVDAYNKGFR 150
|||||||||||||||||||||||.||||||:||||||||||||||||||:
RBAM_028840__ 101 MEKTRYSAFAGTDLELKLRERQITELHLAGLCTDICVLHTAVDAYNKGFQ 150
BSNT_04672___ 151 IVVHKQAVASFNQEGHAWALSHFANSIGAQVAE 183
||:|:.||||||.|||.||||||.|||||||||
RBAM_028840__ 151 IVIHQNAVASFNPEGHEWALSHFKNSIGAQVAE 183
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