Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04797 and RBAM_029510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence pep-align/BSNT_04797___pucR.1.9828.seq
# -bsequence pep-align/RBAM_029510___pucR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04797___pucR-RBAM_029510___pucR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04797___pucR-RBAM_029510___pucR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04797___pucR
# 2: RBAM_029510___pucR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 531
# Identity: 443/531 (83.4%)
# Similarity: 486/531 (91.5%)
# Gaps: 0/531 ( 0.0%)
# Score: 2309.0
#
#
#=======================================
BSNT_04797___ 1 MNIFDVMKIPAFENANLIAGKAGGEREVQHVNMMDAPDIADFLHKNELLV 50
|||:|||||||:|.|.|||||:||.|||||||||||||||||||||||||
RBAM_029510__ 1 MNIYDVMKIPAYERAALIAGKSGGWREVQHVNMMDAPDIADFLHKNELLV 50
BSNT_04797___ 51 TTAYHLKDHPHQLSELIRQMAKRGCAGLGIKTKRYLEDIPKEIIELADSY 100
||||||||.|..|.:|||.|||||||||||||||||..|||:..||||.|
RBAM_029510__ 51 TTAYHLKDRPQLLKDLIRLMAKRGCAGLGIKTKRYLNVIPKDAAELADRY 100
BSNT_04797___ 101 AFPIIELPEHIRLGDIVNATLSHILDMRSNELQQAIYAHKKFTNHIMSGK 150
.||||||||.||||||||||||||||||||||||||||||||||||||||
RBAM_029510__ 101 EFPIIELPEDIRLGDIVNATLSHILDMRSNELQQAIYAHKKFTNHIMSGK 150
BSNT_04797___ 151 GLQSLLKKVSDLLQLPVLLLDQHAKMLSASHQISVETEKLKGTLNTVSGP 200
||||||||:||:|:|||||||||.|:||:||:|.::|..||....::|||
RBAM_029510__ 151 GLQSLLKKLSDILRLPVLLLDQHTKLLSSSHRIPIDTSLLKNICYSLSGP 200
BSNT_04797___ 201 FFTCFSTISDQKTYSVLPIYNHEKNCGYLLIPDMVQAGDKGLILTIEQAA 250
:|||||.:||:|.||||||.|.|||||||:||::||..|||:||||||||
RBAM_029510__ 201 YFTCFSMLSDRKAYSVLPILNVEKNCGYLVIPELVQTADKGMILTIEQAA 250
BSNT_04797___ 251 NVISFELLKENALKQFSRRARNEFFSNFIERSFSSDDEIKNRAKEFKLRW 300
||||||||||||:||||||||||||||||:|||:..:|||:|||||:|||
RBAM_029510__ 251 NVISFELLKENAVKQFSRRARNEFFSNFIDRSFTGHEEIKSRAKEFRLRW 300
BSNT_04797___ 301 DQKYMCIAGKLDRNDESISFTENQLASDSVFEFLEGELSAFPFPPHFFMK 350
|||||||.||||||:::||||||||.||.||:.||||||:||||||.|:|
RBAM_029510__ 301 DQKYMCICGKLDRNEKTISFTENQLVSDHVFDLLEGELSSFPFPPHLFIK 350
BSNT_04797___ 351 GNVGIILIEATDSWSEMHASVISFLEQFQTQVSAQFKRTVSFGISNICQK 400
|||||:||||||||:||||||||||||||.||..||||||||||||||||
RBAM_029510__ 351 GNVGILLIEATDSWNEMHASVISFLEQFQKQVRTQFKRTVSFGISNICQK 400
BSNT_04797___ 401 LIDVPDAFTEASDALQSGHLSRSTAFIQVYHAKDVPELLRLLPVEDLKKF 450
||||||||||||||:.|||||||..|||:||||||||||||||.||:|||
RBAM_029510__ 401 LIDVPDAFTEASDAISSGHLSRSAEFIQIYHAKDVPELLRLLPAEDVKKF 450
BSNT_04797___ 451 YNSTLQSLAEKQQEDQSLLHTLSVYLETHCQISETAKRLYVHRNTVIYRL 500
|.:||||||::|:|||||||||||||||||||||||||||||||||||||
RBAM_029510__ 451 YQATLQSLADRQKEDQSLLHTLSVYLETHCQISETAKRLYVHRNTVIYRL 500
BSNT_04797___ 501 EKCEELLGKSLKDPETTMRLRLALRMQRLIS 531
||||||||||||||||||||||||||||||.
RBAM_029510__ 501 EKCEELLGKSLKDPETTMRLRLALRMQRLIG 531
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