Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04826 and RBAM_029630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence pep-align/BSNT_04826___yurL.1.9828.seq
# -bsequence pep-align/RBAM_029630___yurL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04826___yurL-RBAM_029630___yurL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04826___yurL-RBAM_029630___yurL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04826___yurL
# 2: RBAM_029630___yurL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity: 219/284 (77.1%)
# Similarity: 245/284 (86.3%)
# Gaps: 0/284 ( 0.0%)
# Score: 1137.0
#
#
#=======================================
BSNT_04826___ 1 MKLIAVGDNVVDYYQDQETFYPGGNALNVAVLAKRLGHESSYIGIVGNDE 50
|||||.|||||||||||||||||||||||||||:|||||:|||||:|:||
RBAM_029630__ 1 MKLIAAGDNVVDYYQDQETFYPGGNALNVAVLARRLGHETSYIGILGSDE 50
BSNT_04826___ 51 AAAHLLNVLKLEQVNADYIRQAHGENGMAIVTLDEQGDRIFVRSNKGGIQ 100
||.|:|||||||:||||.||:|:||||||:|||||:|||||..|||||:|
RBAM_029630__ 51 AADHVLNVLKLEKVNADLIRRAYGENGMAVVTLDERGDRIFAGSNKGGVQ 100
BSNT_04826___ 101 SRLRLAFQEKDVSFISGHDLLHTSVYSRLENDLPQLCGLVPVSFDFSTNR 150
|||.|||||.|:|||:||||||||||||:|.|||.|.|.||:|||||..|
RBAM_029630__ 101 SRLTLAFQENDISFIAGHDLLHTSVYSRIERDLPMLSGHVPISFDFSVKR 150
BSNT_04826___ 151 EDDYLRRVCPYVTYAFFSGSDLSESECGELAKTAHGYGAKMVCMTRGGQG 200
::.||..||||||||||||||||||||..||:.|.|:|||:||:|||..|
RBAM_029630__ 151 DEAYLEAVCPYVTYAFFSGSDLSESECVRLAEKARGFGAKIVCLTRGEYG 200
BSNT_04826___ 201 AILSAGDRVYHQPIVEADIIDTLGAGDSFIAGFLTAFCVKQDITYALRQA 250
|:||.|:||||||:|.|||||||||||||||||||.|...|||..||..|
RBAM_029630__ 201 AVLSDGERVYHQPVVRADIIDTLGAGDSFIAGFLTDFFEHQDIRRALTAA 250
BSNT_04826___ 251 AETAAKTCGVYGAFGYGYPYRLEDGGSSEKTRIL 284
|.|||||||.:||||||:|||...|.|||||||.
RBAM_029630__ 251 AGTAAKTCGGFGAFGYGHPYRPGGGKSSEKTRIR 284
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