Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04855 and RBAM_029830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence pep-align/BSNT_04855___yusC.1.9828.seq
# -bsequence pep-align/RBAM_029830___yusC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04855___yusC-RBAM_029830___yusC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04855___yusC-RBAM_029830___yusC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04855___yusC
# 2: RBAM_029830___yusC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity: 301/341 (88.3%)
# Similarity: 329/341 (96.5%)
# Gaps: 0/341 ( 0.0%)
# Score: 1542.0
#
#
#=======================================
BSNT_04855___ 1 MINLQDVSKVYKSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRL 50
||:||:|||:||:|||||||||:|:|.|||||||||||||||||||||||
RBAM_029830__ 1 MIHLQNVSKIYKAKHGDVNAVQDVTLDIKKGEIFGIIGYSGAGKSSLIRL 50
BSNT_04855___ 51 LNGLEKPTSGTVEVAGTKINEVNGRGLRKARHEISMIFQHFNLLWSRTVR 100
|||||||||||||||||::|:|:.|||||||.||||||||||||||||||
RBAM_029830__ 51 LNGLEKPTSGTVEVAGTELNKVSSRGLRKARQEISMIFQHFNLLWSRTVR 100
BSNT_04855___ 101 DNIMFPLEIAGVKKSERIKRANELIKLVGLEGKEKSYPSQLSGGQKQRVG 150
:||||||||||||||||::||:||||||||||||||||||||||||||||
RBAM_029830__ 101 ENIMFPLEIAGVKKSERVRRADELIKLVGLEGKEKSYPSQLSGGQKQRVG 150
BSNT_04855___ 151 IARALANNPKVLLCDEATSALDPQTTDSILDLLSDINERLGLTIVLITHE 200
|||||||||||||||||||||||||||||||||||||:||||||||||||
RBAM_029830__ 151 IARALANNPKVLLCDEATSALDPQTTDSILDLLSDINDRLGLTIVLITHE 200
BSNT_04855___ 201 MHVIRKICNRVAVMENGKVVEEGEVLDVFKNPKEQMTKRFVQQVTEPEET 250
||||||||||||||||||||||||||.||:||:|.|||||||||||||||
RBAM_029830__ 201 MHVIRKICNRVAVMENGKVVEEGEVLQVFRNPREPMTKRFVQQVTEPEET 250
BSNT_04855___ 251 KETLQHLLDDTASGKMVQLTFVGESAEQPLITEMIRNLNVSVNILQGKIS 300
|||:||.|.:||:||.:||:|||::||||||||||||.:|.|||||||||
RBAM_029830__ 251 KETIQHFLQETATGKTIQLSFVGQAAEQPLITEMIRNFDVDVNILQGKIS 300
BSNT_04855___ 301 QTKDGAYGSLFIHIDGDEEEVQNVIRFINDKQVKAEVITNV 341
||||||||||||||||.|:||:||||||.||||:|||||||
RBAM_029830__ 301 QTKDGAYGSLFIHIDGQEKEVENVIRFIKDKQVEAEVITNV 341
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