Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04860 and RBAM_029860

See DNA alignment / Visit BSNT_04860 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence pep-align/BSNT_04860___yusF.1.9828.seq
#    -bsequence pep-align/RBAM_029860___yusF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04860___yusF-RBAM_029860___yusF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04860___yusF-RBAM_029860___yusF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04860___yusF
# 2: RBAM_029860___yusF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:      82/146 (56.2%)
# Similarity:   103/146 (70.5%)
# Gaps:           3/146 ( 2.1%)
# Score: 410.5
# 
#
#=======================================

BSNT_04860___      1 MLAVNFTAFFYNLNVSNLPRQVNKMKIDELEKVMIVEGKSDKEKIESVLN     50
                      :||||||||:||.:............|  |||:||||||||.|:..||.
RBAM_029860__      1 -MAVNFTAFFFNLTLKQSAGDALMYNGD--EKVIIVEGKSDKIKVREVLI     47

BSNT_04860___     51 EPVRIICTNGTISQLRLEELADELYDKDVYILVDADESGEKLRKQLKREF    100
                     ||..|:||||||.|..||:|||.|:|:|||||.|||:||||||||||||.
RBAM_029860__     48 EPAEIVCTNGTIGQTELEDLADRLFDRDVYILTDADDSGEKLRKQLKREL     97

BSNT_04860___    101 NEACHLHIDRAYKEVAAAPRHHVASVLLRANLNVHTIFLERKSRGV    146
                     .||.|::|||.|::|.:.|.||:||||:||..:..|:||::.....
RBAM_029860__     98 PEARHIYIDRTYRQVESCPGHHLASVLIRAGFDADTVFLKKNDLRW    143


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