Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04879 and RBAM_029980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:25
# Commandline: needle
# -asequence pep-align/BSNT_04879___yusP.1.9828.seq
# -bsequence pep-align/RBAM_029980___yusP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04879___yusP-RBAM_029980___yusP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04879___yusP-RBAM_029980___yusP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04879___yusP
# 2: RBAM_029980___yusP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 465/541 (86.0%)
# Similarity: 498/541 (92.1%)
# Gaps: 10/541 ( 1.8%)
# Score: 2370.0
#
#
#=======================================
BSNT_04879___ 1 MKMSKEGKQSKRTLLITGLIIAMFFSALDGTIVGTAMPKIVGDLGGLSMM 50
||.|.|..||||||||||||||||||||||||||:|||||||||||||
RBAM_029980__ 1 --MSIEKKDPKRTLLITGLIIAMFFSALDGTIVGTAIPKIVGDLGGLSMM 48
BSNT_04879___ 51 TWLTTAYLLTSTTIVPIAGKLADLLGRRIVYVSGLIIFMAASALCGMANN 100
||||||||||||||||||||||||||||:||||||:|||.||||||||:|
RBAM_029980__ 49 TWLTTAYLLTSTTIVPIAGKLADLLGRRVVYVSGLLIFMGASALCGMASN 98
BSNT_04879___ 101 MTELIIFRGLQGIGGGIMMPMAMIVIGDLFTGKQRAKFQGVFGAIYGLAS 150
||||||||||||||||:|||||||||||||||||||||||:|||||||||
RBAM_029980__ 99 MTELIIFRGLQGIGGGVMMPMAMIVIGDLFTGKQRAKFQGLFGAIYGLAS 148
BSNT_04879___ 151 VIGPQIGGWIVDSLNWKWVFYINLPVGIIAVIFIARGLQGRQQTGPINFD 200
||||||||||||||||||||||||||||:||||||||||||:||||||||
RBAM_029980__ 149 VIGPQIGGWIVDSLNWKWVFYINLPVGILAVIFIARGLQGRKQTGPINFD 198
BSNT_04879___ 201 IAGIFTMIVGVVSLLLALSFGGKDYAWDSWQILGLFALALIGIVSFIIVE 250
||||||||||:||||||||||||||||.||||||||||||.|||.||..|
RBAM_029980__ 199 IAGIFTMIVGIVSLLLALSFGGKDYAWGSWQILGLFALALAGIVGFIFAE 248
BSNT_04879___ 251 SKAKEPILPMYLFKNRTFTFLNLIGFFMSIGMFGAITFVPFFMQGIVGVS 300
.||||||||||||||||||.|||||||||||||||:||||||||||:|||
RBAM_029980__ 249 IKAKEPILPMYLFKNRTFTVLNLIGFFMSIGMFGAVTFVPFFMQGIIGVS 298
BSNT_04879___ 301 ASESGTIMTPMMISMIITSIIGGQLVYKIGIKPQIIAGMLVMAGGFLLLT 350
|:.|||||||||:||||||||||||||||||||||:.|||:||.||.|||
RBAM_029980__ 299 ATASGTIMTPMMVSMIITSIIGGQLVYKIGIKPQIMIGMLIMAVGFFLLT 348
BSNT_04879___ 351 TLDLDTSKLVATSFMAIIGLGMGLVMPILTLALQESFSKEELGVVTSSSQ 400
||.||||||.||.:||:||||||||||:|||||||:||||||||||||||
RBAM_029980__ 349 TLQLDTSKLAATCYMAVIGLGMGLVMPLLTLALQETFSKEELGVVTSSSQ 398
BSNT_04879___ 401 FFRSIGGTFGITMLGAVMNARSGNLLTDKLVPYLDSLPAQASSFAAQLKG 450
|||.||||||||:||||||||||:||||:|||||||||.|||:||||.||
RBAM_029980__ 399 FFRMIGGTFGITVLGAVMNARSGSLLTDRLVPYLDSLPKQASAFAAQFKG 448
BSNT_04879___ 451 MIDTNPQGLLQSLFSPDAVKQIPAAFSSHIVPILKTSLMDSLHSVFYTGL 500
|||.||:||||||||.:::|||||||||||||:|||||||||||||:|||
RBAM_029980__ 449 MIDKNPEGLLQSLFSQESIKQIPAAFSSHIVPVLKTSLMDSLHSVFFTGL 498
BSNT_04879___ 501 IFIAVGAVFTLFLKPIKLSNKKTEDQQEKEKAAKAVESPSH 541
.|||.|.:.|||:|.|||:||||..|:||.||.
RBAM_029980__ 499 AFIAAGLILTLFVKSIKLTNKKTGKQEEKAKAV-------- 531
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