Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04883 and RBAM_030010

See DNA alignment / Visit BSNT_04883 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:25
# Commandline: needle
#    -asequence pep-align/BSNT_04883___yusT.1.9828.seq
#    -bsequence pep-align/RBAM_030010___yusT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04883___yusT-RBAM_030010___yusT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04883___yusT-RBAM_030010___yusT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04883___yusT
# 2: RBAM_030010___yusT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     201/295 (68.1%)
# Similarity:   249/295 (84.4%)
# Gaps:           4/295 ( 1.4%)
# Score: 1066.0
# 
#
#=======================================

BSNT_04883___      1 MESGDLRVFQMVAREGTITKAALQLGYVQSNVTARIQQLEAELGTTLFLR     50
                     |||||||:||||||||:|||||.:||||||||||||:|||.:|.|.||.|
RBAM_030010__      1 MESGDLRIFQMVAREGSITKAAARLGYVQSNVTARIRQLEEDLKTELFFR     50

BSNT_04883___     51 HNRGMTLSASGKLLLDYANKIIGLLDEASKALSSSAEPSGSLMIGSTQTT    100
                     ||||||||:||.:||.||::::||::||..||:|:.:|||.|||||||||
RBAM_030010__     51 HNRGMTLSSSGTVLLHYADQVVGLIEEAKMALASTDKPSGPLMIGSTQTT    100

BSNT_04883___    101 AAVRLPKLLASYYEEHPNVQLSLTTGHTQFLLDKVLRYELDGAFIGCECH    150
                     ||||||||||||||.:|:|:|||||||||::.|||||||||||||||..|
RBAM_030010__    101 AAVRLPKLLASYYERYPDVELSLTTGHTQYVTDKVLRYELDGAFIGCHFH    150

BSNT_04883___    151 HPELESYPAFEEEPVVVSAASVPDVEEAITKPILVYSTGCSYRETLEKWL    200
                     ||:|.|.||||||.|||:.|:|..:|||:.||:|||||||:||:|||:||
RBAM_030010__    151 HPDLHSIPAFEEEAVVVTPAAVTAIEEAVKKPLLVYSTGCTYRDTLERWL    200

BSNT_04883___    201 RSVGVTQPVIMEFGTLEAIIGGVTAGLGISLLPRTVVQKHEAEGSIRLYP    250
                     .|:|...|.||||||||||||||||||||:||||:|:.:|.|.|::|::.
RBAM_030010__    201 HSIGTAHPAIMEFGTLEAIIGGVTAGLGITLLPRSVITQHAALGAVRIWT    250

BSNT_04883___    251 LPEALSQMKTEFIVRKDSFISSALRTFMDSFTPDKTAESQKSSLL    295
                     :||:.|.|||||:.||||::|.|||.|:|||:..|.:.:..    
RBAM_030010__    251 IPESFSMMKTEFVTRKDSYMSCALRAFIDSFSAKKASGTSL----    291


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