Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04926 and RBAM_030220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence pep-align/BSNT_04926___yvqE.1.9828.seq
# -bsequence pep-align/RBAM_030220___yvqE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04926___yvqE-RBAM_030220___yvqE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04926___yvqE-RBAM_030220___yvqE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04926___yvqE
# 2: RBAM_030220___yvqE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity: 292/360 (81.1%)
# Similarity: 327/360 (90.8%)
# Gaps: 0/360 ( 0.0%)
# Score: 1503.0
#
#
#=======================================
BSNT_04926___ 1 MRKKMLASLQWRAIRMTTGISLLLFACLISFMMFYYRLDPLVLLSSSWFG 50
||||:||::||||:|||.|:||||.|..|:.|:.||.|||::|.||.|||
RBAM_030220__ 1 MRKKLLANIQWRAMRMTAGLSLLLCAVFITLMLLYYGLDPMLLFSSGWFG 50
BSNT_04926___ 51 IPFILILLLISVTVGFASGYMYGNRLKTRIDTLIESILTFENGNFAYRIP 100
|||::||||.|::.|..|||:||.|||||:|||||::|.|||||||||:|
RBAM_030220__ 51 IPFVVILLLASLSAGLISGYVYGGRLKTRMDTLIEAVLKFENGNFAYRVP 100
BSNT_04926___ 101 PLGDDEIGLAADQLNEMAKRVELQVASLQKLSNERAEWQAQMKKSVISEE 150
|||||||||||||||||||||||||.|||||||||||||.|||||||:||
RBAM_030220__ 101 PLGDDEIGLAADQLNEMAKRVELQVTSLQKLSNERAEWQDQMKKSVITEE 150
BSNT_04926___ 151 RQRLARDLHDAVSQQLFAISMMTSAVLEHVKDADDKTVKRIRMVEHMAGE 200
||||||||||||||||||||||||||||.|||||||.|||||||||||||
RBAM_030220__ 151 RQRLARDLHDAVSQQLFAISMMTSAVLEQVKDADDKIVKRIRMVEHMAGE 200
BSNT_04926___ 201 AQNEMRALLLHLRPVTLEGKGLKEGLTELLDEFRKKQPIDIEWDIQDTAI 250
||||||||||||||||||||||||||.|||.||:.|||:||||||.||.:
RBAM_030220__ 201 AQNEMRALLLHLRPVTLEGKGLKEGLIELLKEFKAKQPLDIEWDISDTGV 250
BSNT_04926___ 251 SKGVEDHLFRIVQEALSNVFRHSKASKVTVILGIKNSQLRLKVIDNGKGF 300
|||||||||||||||||||||||||:||||.||.|:.:|:|||||||.||
RBAM_030220__ 251 SKGVEDHLFRIVQEALSNVFRHSKATKVTVRLGAKHQKLQLKVIDNGAGF 300
BSNT_04926___ 301 KMDQVKASSYGLNSMKERASEIGGVAEVISVEGKGTQIEVKVPIFPEEKG 350
.|||||||||||:|:|||||||||:||:|||:||||||:|||||:.:.||
RBAM_030220__ 301 TMDQVKASSYGLHSIKERASEIGGIAEIISVKGKGTQIDVKVPIYQKTKG 350
BSNT_04926___ 351 ENERDSSIID 360
|||.|||:.|
RBAM_030220__ 351 ENESDSSVTD 360
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