Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04977 and RBAM_030490

See DNA alignment / Visit BSNT_04977 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence pep-align/BSNT_04977___yvgK.1.9828.seq
#    -bsequence pep-align/RBAM_030490___yvgK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04977___yvgK-RBAM_030490___yvgK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04977___yvgK-RBAM_030490___yvgK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04977___yvgK
# 2: RBAM_030490___yvgK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     221/309 (71.5%)
# Similarity:   266/309 (86.1%)
# Gaps:           1/309 ( 0.3%)
# Score: 1166.0
# 
#
#=======================================

BSNT_04977___      1 MMNETSSYTIEEVAGLLKVSKLTVYDLIKKGVLPAYRVGRQMRVDEEDLK     50
                      |.|.:|||||||||||||||||||||||||::|||||||||||||||||
RBAM_030490__      1 -MTEATSYTIEEVAGLLKVSKLTVYDLIKKGLIPAYRVGRQMRVDEEDLK     49

BSNT_04977___     51 QYKTNMRMSQPIAATEAPKQVQEAEPDGRRNVMISGQDISMDLLSKHLEN    100
                     |||.|||||:..:.:|||...:..||:.|::|:|||||:|||||||.||.
RBAM_030490__     50 QYKANMRMSKKPSVSEAPDPSRGREPEKRQSVIISGQDVSMDLLSKQLEQ     99

BSNT_04977___    101 AIQETPLRKYKGSLNSLIDMYQGKCDIVSLHLYDAETGQYNAPYVKRILT    150
                     .||..|||||.|||||||:||:|.||||||||||.||||||.|||||||:
RBAM_030490__    100 TIQAAPLRKYSGSLNSLIEMYRGACDIVSLHLYDGETGQYNIPYVKRILS    149

BSNT_04977___    151 GEPFCLINVVLRKAGLYVKKGNPKNIQGWKDLKRADIRIINREKGSGARV    200
                     ||||.|.:||||:||||||||||.||||::||.|.|:||:||||||||||
RBAM_030490__    150 GEPFALFHVVLRQAGLYVKKGNPLNIQGFQDLSRKDVRIVNREKGSGARV    199

BSNT_04977___    201 LLDEQLGLLGVNPADVKGYGDIVTDHYAAASQVSSGQADAGIGAQHAAHM    250
                     ||||||...|:.|:||.||.||||||.:||||||||:||.|:|:||||||
RBAM_030490__    200 LLDEQLRSFGITPSDVAGYHDIVTDHLSAASQVSSGKADIGVGSQHAAHM    249

BSNT_04977___    251 GSVDFIPLIDEQYDIVVLKKHEQLLKAVKEILNSEEYKANLSHLNGYETK    300
                     ...||||:|.||||:||||::.:|:::|::||||||:|:.||.|:||:||
RBAM_030490__    250 AGTDFIPVISEQYDVVVLKQNRELVQSVQDILNSEEFKSQLSQLSGYDTK    299

BSNT_04977___    301 LTGKVMLET    309
                     :||:::.||
RBAM_030490__    300 MTGRLIYET    308


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