Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04983 and RBAM_030580

See DNA alignment / Visit BSNT_04983 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:31
# Commandline: needle
#    -asequence pep-align/BSNT_04983___yvgO.1.9828.seq
#    -bsequence pep-align/RBAM_030580___yvgO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04983___yvgO-RBAM_030580___yvgO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04983___yvgO-RBAM_030580___yvgO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04983___yvgO
# 2: RBAM_030580___yvgO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:     128/161 (79.5%)
# Similarity:   143/161 (88.8%)
# Gaps:           0/161 ( 0.0%)
# Score: 702.0
# 
#
#=======================================

BSNT_04983___      1 MKRIRIPMTLALGAALTIAPLSFASAEENPAPKMSQTTAAGTTAADVGLN     50
                     |||:||||::||||||::.||||.||:|.|.|:.....::..:|.|||||
RBAM_030580__      1 MKRMRIPMSVALGAALSLTPLSFVSAKETPVPQNMAQQSSDASAKDVGLN     50

BSNT_04983___     51 VNLDVLGIANQIADAIKSAQNRDGFVKNLMESSFYASGQKYNVMVFNLSQ    100
                     :::|:|||.|.|||||||||||||||||||||||||||||||||||||||
RBAM_030580__     51 IDVDLLGIGNSIADAIKSAQNRDGFVKNLMESSFYASGQKYNVMVFNLSQ    100

BSNT_04983___    101 EYEDHLNGVQFYGSAVYDGITYGIWVFEDGTFTNKGDGGWINWAFRGWFD    150
                     |||||.||||||||||||||||||||||||:|||||||||||||||||||
RBAM_030580__    101 EYEDHFNGVQFYGSAVYDGITYGIWVFEDGSFTNKGDGGWINWAFRGWFD    150

BSNT_04983___    151 RDGSTVAFHRP    161
                     |||..|.||||
RBAM_030580__    151 RDGDHVEFHRP    161


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