Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05124 and RBAM_031140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence pep-align/BSNT_05124___yvbJ.1.9828.seq
# -bsequence pep-align/RBAM_031140___yvbJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05124___yvbJ-RBAM_031140___yvbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05124___yvbJ-RBAM_031140___yvbJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05124___yvbJ
# 2: RBAM_031140___yvbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 605
# Identity: 373/605 (61.7%)
# Similarity: 467/605 (77.2%)
# Gaps: 10/605 ( 1.7%)
# Score: 1990.0
#
#
#=======================================
BSNT_05124___ 1 -MFCKECGQKNNEGAKFCKQCGTPVGGGSKQANQETASTAETRQAPRKPI 49
.|||.|||:|||.|.|||:||.|:|.||:...|.....||.....||||
RBAM_031140__ 1 MFFCKHCGQQNNEEAHFCKECGKPIGKGSRLERQAAVKAAEPASQMRKPI 50
BSNT_05124___ 50 PKKTIILWSSIAAACVILFAAYKTGAYFTSKDRLVDKFEQAVNDEDQDQI 99
||||:.:|..||||.::|.|||||||:.||:.||.|:|||||:|.|..::
RBAM_031140__ 51 PKKTLFMWGGIAAALILLIAAYKTGAWLTSEKRLTDQFEQAVHDGDTKRL 100
BSNT_05124___ 100 ATLLTPVNDKLKLTKNNVKPFLTYLKDHPDKKDELFASLRDETAQKDIVY 149
|.||||.:.||||.:.||||.|.|.|.| |||.||||..:::.|.||
RBAM_031140__ 101 AALLTPSDKKLKLNETNVKPLLAYAKKH----DELLASLRGNSSETDAVY 146
BSNT_05124___ 150 AEKDGKSLLVFDHYDLKVAPVYFEVSSNYKNTDLYVNKEEAGSVKKADQA 199
.:|:||:||:||||:|||.||||.::||||..|||:|.|:.|:|||||:.
RBAM_031140__ 147 VKKEGKTLLLFDHYELKVDPVYFRITSNYKGADLYINSEKTGTVKKADET 196
BSNT_05124___ 200 QTLGPYIPGEYTVSAKLTNDVVDLVKKEDIQAVGDSSFRVDLSLEADDVT 249
|..|||.||.||..|||.|:.||:|||::.:|.|..:...||.|:|:|||
RBAM_031140__ 197 QIFGPYAPGVYTAEAKLKNETVDVVKKQEAEAAGSRNVEFDLPLDAEDVT 246
BSNT_05124___ 250 FSLADDIKSGKGDLLINGKSIHKDPFKSVTYGPLLTDGSMTASVEAEFPW 299
|:.||..||.||||||||||:|||||.|||||||||||||||:|||:|||
RBAM_031140__ 247 FTPADSFKSAKGDLLINGKSVHKDPFTSVTYGPLLTDGSMTAAVEADFPW 296
BSNT_05124___ 300 GKTKTAGVPIDDNEMKLTLIPDQDTQEQIMNTIVKTTKQYSKALSDGNIA 349
||.|||.|||:..::.||||||||||:.||:|||||||||:||::|||..
RBAM_031140__ 297 GKMKTADVPINSTDVDLTLIPDQDTQQTIMDTIVKTTKQYTKAMADGNTD 346
BSNT_05124___ 350 QMTEASANWKAETKDTVDSMKSADSYLKDRYLETDFDLDTFALSQKNDGT 399
|||||.:.||.:||:.|..|||:.::|||:|.||.||||:||:||:| |.
RBAM_031140__ 347 QMTEAGSAWKEQTKEVVSGMKSSGTFLKDQYKETSFDLDSFAISQEN-GR 395
BSNT_05124___ 400 WQVSVTGKELHQSSTYNDYTKSEMTDDSPSYEYLLSYDKKQKKWIFEDAE 449
|||:|.|||||:|:.::..||.:|.:..||:.|:||||.|.|||:||.|:
RBAM_031140__ 396 WQVTVMGKELHESAYFDGNTKPDMEEAEPSFHYVLSYDTKHKKWVFEKAD 445
BSNT_05124___ 450 STFESAGTNIKKIKNDKPETYTSAWAGSKNKGSESSASGNVTDEQVTLFM 499
...:|:|||:||||||:|:|||||||.||. ::|||:||:||||.||
RBAM_031140__ 446 PASDSSGTNVKKIKNDQPKTYTSAWASSKG----NTASGSVTNEQVTSFM 491
BSNT_05124___ 500 GSYLQSQADAVNQNNFSLMEDSLEKGSSLYSDQQHLVAKLNKEGTTEDFN 549
..||.:|:.||:.|||::||.:||:||.||:|||.||.||:.|||||.||
RBAM_031140__ 492 TDYLTNQSSAVSLNNFAIMEGNLEEGSPLYADQQKLVKKLHSEGTTEVFN 541
BSNT_05124___ 550 NYEVKSWSQNGSAVTIKTYEEFEITKSGGSPKLRTYNWTYTGVVKNGRIY 599
...|||:||.||.:||.|||||.|||:|||||||||||||.|:||:||||
RBAM_031140__ 542 EVNVKSFSQKGSHLTIHTYEEFYITKAGGSPKLRTYNWTYGGIVKDGRIY 591
BSNT_05124___ 600 LTSIQ 604
|||||
RBAM_031140__ 592 LTSIQ 596
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