Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05276 and RBAM_031890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:42
# Commandline: needle
# -asequence pep-align/BSNT_05276___yvdD.1.9828.seq
# -bsequence pep-align/RBAM_031890___yvdD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05276___yvdD-RBAM_031890___yvdD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05276___yvdD-RBAM_031890___yvdD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05276___yvdD
# 2: RBAM_031890___yvdD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 191
# Identity: 172/191 (90.1%)
# Similarity: 182/191 (95.3%)
# Gaps: 0/191 ( 0.0%)
# Score: 922.0
#
#
#=======================================
BSNT_05276___ 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIA 50
|||||||||||||.||.|||||||||.|||||||||||||||:|||||:|
RBAM_031890__ 1 MKTICVFAGSNPGVNEEYKRKAAELGEYMAEQGIGLVYGGSRIGLMGTVA 50
BSNT_05276___ 51 DAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADG 100
||:|..||.|:|||||||||||||||||||||||:|||||||||||||||
RBAM_031890__ 51 DALMAGGGKAVGVMPSGLFSGEVVHQNLTELIEVSGMHERKAKMSELADG 100
BSNT_05276___ 101 FISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSI 150
:|:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_031890__ 101 YIAMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSI 150
BSNT_05276___ 151 QEGFSNESHLKLIHSSSRPDELIEQMQNYSYPILEKKWTEI 191
||||||||||||||||||||||||||..|:||||:|||.|:
RBAM_031890__ 151 QEGFSNESHLKLIHSSSRPDELIEQMNRYTYPILDKKWREL 191
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