Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05278 and RBAM_031900

See DNA alignment / Visit BSNT_05278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:42
# Commandline: needle
#    -asequence pep-align/BSNT_05278.1.9828.seq
#    -bsequence pep-align/RBAM_031900___yvdC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05278-RBAM_031900___yvdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05278-RBAM_031900___yvdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05278
# 2: RBAM_031900___yvdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      53/106 (50.0%)
# Similarity:    64/106 (60.4%)
# Gaps:          37/106 (34.9%)
# Score: 282.0
# 
#
#=======================================

BSNT_05278         1 -------------------------------------MARAVRAYEIGRD     13
                                                          :||||||||||||
RBAM_031900__      1 MQMAKAEQWTKDFYEKRGWTAYGPFIRIGFLMEEAGELARAVRAYEIGRD     50

BSNT_05278        14 RPDEKESSRAEQKQELIEEMGDVIGNIAILADMYGVSLEDVMKAHQEKLT     63
                     |||||::::||::||||||||||:||:|||||.||::|||.||||||||.
RBAM_031900__     51 RPDEKDATQAERRQELIEEMGDVLGNLAILADKYGITLEDAMKAHQEKLI    100

BSNT_05278        64 KRFEHA     69
                     ||||..
RBAM_031900__    101 KRFETE    106


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