Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05327 and RBAM_032190
See
DNA alignment /
Visit
BSNT_05327 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence pep-align/BSNT_05327___hprK.1.9828.seq
# -bsequence pep-align/RBAM_032190___hprK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05327___hprK-RBAM_032190___hprK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05327___hprK-RBAM_032190___hprK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05327___hprK
# 2: RBAM_032190___hprK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity: 298/310 (96.1%)
# Similarity: 307/310 (99.0%)
# Gaps: 0/310 ( 0.0%)
# Score: 1502.0
#
#
#=======================================
BSNT_05327___ 1 MAKVRTKDVMEQFNLELISGEEGINRPITMSDLSRPGIEIAGYFTYYPRE 50
|||||||||||||:||||||||||||||||||||||||||||||||||||
RBAM_032190__ 1 MAKVRTKDVMEQFHLELISGEEGINRPITMSDLSRPGIEIAGYFTYYPRE 50
BSNT_05327___ 51 RVQLLGKTELSFFEQLPEEEKKQRMDSLCTDVTPAIILSRDMPIPQELID 100
|||||||||||||:|||||:|||||.|||||||||||||||||||.||::
RBAM_032190__ 51 RVQLLGKTELSFFDQLPEEDKKQRMKSLCTDVTPAIILSRDMPIPPELVE 100
BSNT_05327___ 101 ASEKNGVPVLRSPLKTTRLSSRLTNFLESRLAPTTAIHGVLVDIYGVGVL 150
|||:||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032190__ 101 ASEQNGVPVLRSPLKTTRLSSRLTNFLESRLAPTTAIHGVLVDIYGVGVL 150
BSNT_05327___ 151 ITGKSGVGKSETALELVKRGHRLVADDCVEIRQEDQDTLVGNAPELIEHL 200
||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_032190__ 151 ITGKSGVGKSETALELVKRGHRLVADDCVEIRQEDQDTLVGNAPDLIEHL 200
BSNT_05327___ 201 LEIRGLGIINVMTLFGAGAVRSNKRITIVMNLELWEQGKQYDRLGLEEET 250
||||||||||||||||||||||||||||||:||||||||||||||||||.
RBAM_032190__ 201 LEIRGLGIINVMTLFGAGAVRSNKRITIVMDLELWEQGKQYDRLGLEEEK 250
BSNT_05327___ 251 MKIIDTEITKLTIPVRPGRNLAVIIEVAAMNFRLKRMGLNAAEQFTNKLA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_032190__ 251 MKIIDTEITKLTIPVRPGRNLAVIIEVAAMNFRLKRMGLNAAEQFTNKLA 300
BSNT_05327___ 301 DVIEDGEQEE 310
||||||||:|
RBAM_032190__ 301 DVIEDGEQDE 310
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.