Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05380 and RBAM_032510

See DNA alignment / Visit BSNT_05380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05380___hag.1.9828.seq
#    -bsequence pep-align/RBAM_032510___hag.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05380___hag-RBAM_032510___hag.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05380___hag-RBAM_032510___hag.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05380___hag
# 2: RBAM_032510___hag
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     188/308 (61.0%)
# Similarity:   218/308 (70.8%)
# Gaps:          35/308 (11.4%)
# Score: 842.0
# 
#
#=======================================

BSNT_05380___      1 MRINHNIAALNTLNRLSSNNGASQKNMEKLSSGLRINRAGDDAAGLAISE     50
                     ||||||||||||..:|::.:.::.||||||||||||||||||||||||||
RBAM_032510__      1 MRINHNIAALNTSRQLNAGSNSAAKNMEKLSSGLRINRAGDDAAGLAISE     50

BSNT_05380___     51 KMRGQIRGLEMASKNSQDGISLIQTAEGALTETHSILQRVRELVVQAGN-     99
                     |||.|||||:|||||:||||||||||||||.||||||||:.||..||.| 
RBAM_032510__     51 KMRSQIRGLDMASKNAQDGISLIQTAEGALNETHSILQRMSELATQAAND    100

BSNT_05380___    100 -TGTQDGTDLQAIQDEITSLVEEIGGGTNANGISDRTEFNGKKLLNGDFS    148
                      ..|.|..:||...|:::|.|..         ||..||||.||||:|   
RBAM_032510__    101 TNTTSDRAELQKEMDQLSSEVTR---------ISTDTEFNTKKLLDG---    138

BSNT_05380___    149 QASGKSLTFQIGANSSQQLSVNIESMAATAIGALDTDGTTLLTGQAVSDI    198
                       :...||||||||..|.:.::|..|          |..:|..|.|.:.|
RBAM_032510__    139 --TATDLTFQIGANEGQTMKLSINKM----------DSESLAVGTATAGI    176

BSNT_05380___    199 DVTKFKDNAADTATVGFNAQLKTVDDAINTVSKQRSKLGAVQNRLEHTIN    248
                     |::...| ||.||       |.|:..||:|||.:|:||||||||||||||
RBAM_032510__    177 DISTSAD-AASTA-------LTTIKTAIDTVSSERAKLGAVQNRLEHTIN    218

BSNT_05380___    249 NLSASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQ    298
                     ||..|.||||:|||||||||||.||.|:||||||:|||||||||||||||
RBAM_032510__    219 NLGTSSENLTSAESRIRDVDMASEMMEYTKNNILTQASQAMLAQANQQPQ    268

BSNT_05380___    299 NVLQLLR-    305
                     .|||||: 
RBAM_032510__    269 QVLQLLKG    276


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