Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05454 and RBAM_032880

See DNA alignment / Visit BSNT_05454 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:55
# Commandline: needle
#    -asequence pep-align/BSNT_05454___tagA.1.9828.seq
#    -bsequence pep-align/RBAM_032880___tagA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05454___tagA-RBAM_032880___tagA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05454___tagA-RBAM_032880___tagA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05454___tagA
# 2: RBAM_032880___tagA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     169/260 (65.0%)
# Similarity:   212/260 (81.5%)
# Gaps:           4/260 ( 1.5%)
# Score: 894.5
# 
#
#=======================================

BSNT_05454___      1 MLQTETVHHLAYVNGDLPGFLSHLEESFIDRNEGAFIATVNPEIGYAAAK     50
                      :|||.||:|:||||:|..|:|:|:..:|.:.:||.||||||||||||||
RBAM_032880__      1 -MQTEMVHNLSYVNGNLQEFISYLDTYYIAQKQGAVIATVNPEIGYAAAK     49

BSNT_05454___     51 DKGYFKTVSSADFILPDGIGIVLTSRLINSRLKSRIAGYDVFINLLGLAD    100
                     ||||.:.:|||||:||||||:||.|||....|||||||:|||:.|||||:
RBAM_032880__     50 DKGYHQVISSADFVLPDGIGVVLMSRLTQHPLKSRIAGFDVFLALLGLAN     99

BSNT_05454___    101 RKKKRVFLYGAKQEIIQAVADRLSTEYPGIELAGYSHGYVKDKDEVAKQI    150
                     |:.|::|||||||:::.||.:|:|.|||.||:.|.|:||..||..|||||
RBAM_032880__    100 RQSKKIFLYGAKQDVLDAVLNRISKEYPNIEVVGASNGYEADKRFVAKQI    149

BSNT_05454___    151 AAAKPDMVFVALGYPHQEKFIYEHKHLFPQAIAIGIGGSFDVFSGKVKRA    200
                     :.||||:|||||||||||:||||:|||||||::||:|||||||||.||||
RBAM_032880__    150 SRAKPDLVFVALGYPHQEQFIYEYKHLFPQAVSIGLGGSFDVFSGTVKRA    199

BSNT_05454___    201 PKIFIKLNLEWMYRLLTNPTRWKRMLNIPKYVFSVLKEERVQKQRHYYPE    250
                     |:..||.||||:|||||||.|||||||||||.|:||:..:..|.  .|.:
RBAM_032880__    200 PEWMIKTNLEWLYRLLTNPWRWKRMLNIPKYAFTVLRNNKSNKS--LYSK    247

BSNT_05454___    251 QIKEQSKIDV    260
                     |.::|:|.. 
RBAM_032880__    248 QAEDQTKQL-    256


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