Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05542 and RBAM_033530

See DNA alignment / Visit BSNT_05542 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence pep-align/BSNT_05542___ywpH.1.9828.seq
#    -bsequence pep-align/RBAM_033530___ywpH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05542___ywpH-RBAM_033530___ywpH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05542___ywpH-RBAM_033530___ywpH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05542___ywpH
# 2: RBAM_033530___ywpH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:      85/113 (75.2%)
# Similarity:    98/113 (86.7%)
# Gaps:           0/113 ( 0.0%)
# Score: 455.0
# 
#
#=======================================

BSNT_05542___      1 MFNQVMLVGRLTKDPDLRYTSTGAAVAHVTLAVNRSFKNASGEIEADYVN     50
                     |||.|||||||||||:||:|:.|..|||:||||||:||:||||...|:||
RBAM_033530__      1 MFNHVMLVGRLTKDPELRFTAAGIPVAHITLAVNRNFKSASGETGTDFVN     50

BSNT_05542___     51 CTLWRKTAENTALYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEVLADTV    100
                     ||:|||.||||||||||||:|||||||||||||..:||.||||||:||||
RBAM_033530__     51 CTIWRKNAENTALYCQKGSMVGVSGRIQTRSYEKTDGVKVYVTEVMADTV    100

BSNT_05542___    101 RFMDPKPREKAAD    113
                     ||||.|.:|..|:
RBAM_033530__    101 RFMDQKQKEPLAE    113


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