Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05685 and RBAM_034360

See DNA alignment / Visit BSNT_05685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:11
# Commandline: needle
#    -asequence pep-align/BSNT_05685.1.9828.seq
#    -bsequence pep-align/RBAM_034360___ywjC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05685-RBAM_034360___ywjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05685-RBAM_034360___ywjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05685
# 2: RBAM_034360___ywjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 90
# Identity:      48/90 (53.3%)
# Similarity:    60/90 (66.7%)
# Gaps:          24/90 (26.7%)
# Score: 267.0
# 
#
#=======================================

BSNT_05685         1 ------------------------MCHSGSHEVYIYSKKTMCKIKSLIEL     26
                                             :||:|.||:||||||||||||.||||
RBAM_034360__      1 MKNITSLKIAAKKFTLRNMLQLYQLCHTGGHELYIYSKKTMCKIKDLIEL     50

BSNT_05685        27 ETFRMAHNEKEYLIVVEGTKASQLIEKFQNLIEPAEREAL     66
                     |||||||.|:||||||||.||.||:::|:::||||::||.
RBAM_034360__     51 ETFRMAHKEQEYLIVVEGKKAVQLVDRFKHIIEPAQKEAH     90


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