Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05724 and RBAM_034500

See DNA alignment / Visit BSNT_05724 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:13
# Commandline: needle
#    -asequence pep-align/BSNT_05724___albG.1.9828.seq
#    -bsequence pep-align/RBAM_034500___albG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05724___albG-RBAM_034500___albG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05724___albG-RBAM_034500___albG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05724___albG
# 2: RBAM_034500___albG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 257
# Identity:     125/257 (48.6%)
# Similarity:   137/257 (53.3%)
# Gaps:          99/257 (38.5%)
# Score: 607.0
# 
#
#=======================================

BSNT_05724___      1 MKKNTVFTLLLLLIGMAAYSFGWVQAVAEAAAQYVQMINNDAVRLGLLAC     50
                                                                       
RBAM_034500__      0 --------------------------------------------------      0

BSNT_05724___     51 TAALLMLPAFLYLHYVTQSVKNMTAAFQKLTQSHQSCCDFQQHNLCSRYA    100
                                           ||||||||||||:|||||:||.||||.|
RBAM_034500__      1 ----------------------MTAAFQKLTQSHRSCCDFRQHRLCSRNA     28

BSNT_05724___    101 EDVKSLRDSYKNVRQTYVMAAVLCQVIIFGCMFEIVKAVPFRLHTPPALS    150
                     .|||:|||||||||||.||||||||||||||:||||||||||.|||.|:|
RBAM_034500__     29 NDVKALRDSYKNVRQTPVMAAVLCQVIIFGCVFEIVKAVPFRFHTPLAVS     78

BSNT_05724___    151 MGLAMLLILYLLFCMRTYLRQLFRHGSLFRKVFAGVLAAAGIWWMLSFSI    200
                     ||||:|||||||:.|||||.|||:|.|||:|..||.|..||:|.||||:|
RBAM_034500__     79 MGLAVLLILYLLYFMRTYLLQLFQHVSLFKKGHAGALTGAGVWRMLSFTI    128

BSNT_05724___    201 SELLFLIILAAIQQIGSFIYKRFSYRSTASLDL-----------------    233
                     |||||||||||||||||||...|   ..|:|.|                 
RBAM_034500__    129 SELLFLIILAAIQQIGSFILNDF---FIAALLLSTCEISYIAIADGPVPT    175

BSNT_05724___    233 -------    233
                            
RBAM_034500__    176 GITVMAV    182


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