Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05729 and RBAM_034530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:14
# Commandline: needle
# -asequence pep-align/BSNT_05729___rapF.1.9828.seq
# -bsequence pep-align/RBAM_034530___rapF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05729___rapF-RBAM_034530___rapF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05729___rapF-RBAM_034530___rapF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05729___rapF
# 2: RBAM_034530___rapF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity: 299/381 (78.5%)
# Similarity: 339/381 (89.0%)
# Gaps: 0/381 ( 0.0%)
# Score: 1586.0
#
#
#=======================================
BSNT_05729___ 1 MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLH 50
|..|:|||::|||||||||||||||||||||||||||:||..:|:|||||
RBAM_034530__ 1 MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLH 50
BSNT_05729___ 51 LYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDKKQARLTGLLE 100
|||||||||||||||||||||..||||||||||||.:||||||.|||.|:
RBAM_034530__ 51 LYYSLMEFRHNLMLEYLEPLESQRIEEQPRLSDLLADIDKKQALLTGRLD 100
BSNT_05729___ 101 YYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSES 150
||||||||||||:.|||||||:||||||.||.||||.||||||:||||||
RBAM_034530__ 101 YYFNFFRGMYELECREYLSAIQFFKKAEYKLDFVKDCIEKAEFYFKMSES 150
BSNT_05729___ 151 YYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYED 200
||||||||||||||||||:||.:.||||||:|||||||||||||||||::
RBAM_034530__ 151 YYYMKQTYFSMDYARQAYKIYHKQEAYNIRVLQCHSLFATNFLDLKQYDE 200
BSNT_05729___ 201 AISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 250
||.||:|||:|||||:|||||||||||||||.|||..|:.||.|.|||||
RBAM_034530__ 201 AIQHFKKAYAMAEAEQQPQLMGRTLYNIGLCFNSQENYKPAIDYIKRAIA 250
BSNT_05729___ 251 VFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIY 300
|||:.||:.|||||||||||||||:|.|..|.:||.||::|:::|.|.:|
RBAM_034530__ 251 VFEDGNIITSLPQAYFLITQIHYKIGNMAIARQYHDKGVSYAEEAEDSLY 300
BSNT_05729___ 301 LSEFEFLKSLYLSGPDEEAIQGFFDFLESKMLYADLEDFAIDVAKYYHER 350
::|:|||:|||:..||||||...||||..|.:||||||||:|||||||||
RBAM_034530__ 301 IAEYEFLESLYVGEPDEEAIMECFDFLRDKSMYADLEDFALDVAKYYHER 350
BSNT_05729___ 351 KNFQKASAYFLKVEQVRQLIQGGVSLYEIEV 381
:||:||||||||||:.||.|||||.||||||
RBAM_034530__ 351 ENFEKASAYFLKVEETRQQIQGGVKLYEIEV 381
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