Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05740 and RBAM_034660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:15
# Commandline: needle
# -asequence pep-align/BSNT_05740___ywhC.1.9828.seq
# -bsequence pep-align/RBAM_034660___ywhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05740___ywhC-RBAM_034660___ywhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05740___ywhC-RBAM_034660___ywhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05740___ywhC
# 2: RBAM_034660___ywhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 190/219 (86.8%)
# Similarity: 207/219 (94.5%)
# Gaps: 0/219 ( 0.0%)
# Score: 1005.0
#
#
#=======================================
BSNT_05740___ 1 MDRFLYYPLSLMPYLVITLIVSFTMHELAHAYVAYKFGDDTAKKQGRLTL 50
|||||||||.||||:||||||:|||||||||||||:||||||.:||||||
RBAM_034660__ 1 MDRFLYYPLELMPYVVITLIVAFTMHELAHAYVAYRFGDDTAARQGRLTL 50
BSNT_05740___ 51 NPIKHLDPFGTILILVAGFGWARPIPVNRRFFKKPRLAGVLVSIAGPVSN 100
|||||||.||||||||||||||||:|||||.||:|||||||||:||||||
RBAM_034660__ 51 NPIKHLDVFGTILILVAGFGWARPVPVNRRAFKRPRLAGVLVSVAGPVSN 100
BSNT_05740___ 101 LILAFIGFFLLVLMHAYGMEMLAAFSTGLDQFFSIWIQLNLVLFLFNLLP 150
|:||||||||||||||||||:|:|||.|||:||||||||||.|.||||||
RBAM_034660__ 101 LLLAFIGFFLLVLMHAYGMELLSAFSMGLDRFFSIWIQLNLALCLFNLLP 150
BSNT_05740___ 151 LPPLDGYRIIEDLVPPGVRAKMTQAESYGFIVFLVLFVTPLGSYVLWPML 200
||||||||||||||||||||||||.||||.||||||||||:||||:||:|
RBAM_034660__ 151 LPPLDGYRIIEDLVPPGVRAKMTQFESYGIIVFLVLFVTPVGSYVVWPLL 200
BSNT_05740___ 201 NAGRDSILKLFSAIFQPLL 219
:.|||.|||:|:.||||||
RBAM_034660__ 201 SEGRDWILKVFAIIFQPLL 219
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