Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05756 and RBAM_034730

See DNA alignment / Visit BSNT_05756 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:15
# Commandline: needle
#    -asequence pep-align/BSNT_05756___rsfA.1.9828.seq
#    -bsequence pep-align/RBAM_034730___rsfA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05756___rsfA-RBAM_034730___rsfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05756___rsfA-RBAM_034730___rsfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05756___rsfA
# 2: RBAM_034730___rsfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity:     221/258 (85.7%)
# Similarity:   243/258 (94.2%)
# Gaps:           1/258 ( 0.4%)
# Score: 1135.0
# 
#
#=======================================

BSNT_05756___      1 MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034730__      1 MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACG     50

BSNT_05756___     51 FRWNAVVRHQYEKALQLAKKQRKQRMRALGNGQPAKKRLLYQPPAVDPEI    100
                     |||||||||||||||||||||||||||||||||||||:|||||||.|.:|
RBAM_034730__     51 FRWNAVVRHQYEKALQLAKKQRKQRMRALGNGQPAKKKLLYQPPAPDADI    100

BSNT_05756___    101 IQETAAEEPVKTETPSVENEQPLMSGEHMPFVDESFKEELASLSHLLSPQ    150
                     :|||||||.|:||.|. |:.|.:|||||||:||||||||||||||||:||
RBAM_034730__    101 MQETAAEETVQTEAPK-EDRQAVMSGEHMPYVDESFKEELASLSHLLAPQ    149

BSNT_05756___    151 TPAAAPEMTMNDVIRFLQNYEGNNEQSSALKMENERLKKENQELQNKTEQ    200
                     .|:...|:||.|||:|||:|||:.:|:|||:|||:|||:||||||:||||
RBAM_034730__    150 QPSQKAELTMADVIQFLQSYEGSGKQTSALQMENDRLKRENQELQSKTEQ    199

BSNT_05756___    201 LEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEEDEHASPSFKMDRN    250
                     |||.|:||||||||||||||||||||||||||||||:|||||||||||||
RBAM_034730__    200 LEAAVEKLEKDQKTIQEDYETLVKIMNRARKLVLFEDDEHASPSFKMDRN    249

BSNT_05756___    251 GNLEKLAE    258
                     |||||:||
RBAM_034730__    250 GNLEKMAE    257


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