Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05793 and RBAM_035110

See DNA alignment / Visit BSNT_05793 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:18
# Commandline: needle
#    -asequence pep-align/BSNT_05793___spsF.1.9828.seq
#    -bsequence pep-align/RBAM_035110___spsF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05793___spsF-RBAM_035110___spsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05793___spsF-RBAM_035110___spsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05793___spsF
# 2: RBAM_035110___spsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     145/247 (58.7%)
# Similarity:   182/247 (73.7%)
# Gaps:           7/247 ( 2.8%)
# Score: 757.5
# 
#
#=======================================

BSNT_05793___      1 -MNDILFIIQARMGSTRLPGKVLRPLGSNRLLDILVHRVRQSAFYQKDRD     49
                      |.||||||||||||.|||||||:|:|...:||::|.||||||:|.:.||
RBAM_035110__      1 MMTDILFIIQARMGSGRLPGKVLKPIGGYTILDMIVKRVRQSAYYDQSRD     50

BSNT_05793___     50 NLVIATSDKETDDILEAHCIKQGFRVFRGSEERVLDRFVKVIEAVKPSVI     99
                     ||::|:||.:|||||.||||.:.:||.||||:.|||||.:|||.|||.:.
RBAM_035110__     51 NLIVASSDSKTDDILSAHCISKNYRVHRGSEQCVLDRFAQVIEQVKPDIA    100

BSNT_05793___    100 IRLTGDNPFVDPELLDVMIKAHFDQGSDYTYILNAPLGICGEVVNANLLI    149
                     :|||||||||||.|||.:|::|.||.:|||||...||||.||.|||.||.
RBAM_035110__    101 VRLTGDNPFVDPSLLDFLIQSHLDQHADYTYICGTPLGIGGEAVNARLLT    150

BSNT_05793___    150 DISRIQNMEDQYQEHVTLYIRNHPALYRVQFLEAPERFRAPQYRLTIDTK    199
                     :|:..:.:.|:|||||||.||..|..||:.|.|.|:..|||..|:|:||:
RBAM_035110__    151 EINADKMLADKYQEHVTLLIRESPEKYRLLFPEPPQELRAPHLRMTVDTE    200

BSNT_05793___    200 EDYESIKALYQKAGERPDVSASELITLLNRNPDAAT------EREAD    240
                     |||...:.||.|||.|||:.|.|||.|||.:|:...      ::|||
RBAM_035110__    201 EDYRLARELYVKAGSRPDIPAKELIHLLNSDPELRAINQMIRQKEAD    247


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