Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05807 and RBAM_035190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:19
# Commandline: needle
# -asequence pep-align/BSNT_05807___ywdJ.1.9828.seq
# -bsequence pep-align/RBAM_035190___ywdJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05807___ywdJ-RBAM_035190___ywdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05807___ywdJ-RBAM_035190___ywdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05807___ywdJ
# 2: RBAM_035190___ywdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 338/440 (76.8%)
# Similarity: 393/440 (89.3%)
# Gaps: 1/440 ( 0.2%)
# Score: 1754.0
#
#
#=======================================
BSNT_05807___ 1 MKLVLGALQWTAFIIAAAIVVPVAVAQSFHLDHSDSARLIQSTFFVLGIA 50
|||:||.||||||:||||||||||:||||||:|:|||.||||||||||:|
RBAM_035190__ 1 MKLILGGLQWTAFMIAAAIVVPVAIAQSFHLNHADSAALIQSTFFVLGVA 50
BSNT_05807___ 51 AVIQCLKGHRLPINESPAGLWWGVYTIYAGLTGTVFATYGDTLRGLQGAL 100
||||||:|||||||||||||||||||||.|||||||||:|:|||.|||||
RBAM_035190__ 51 AVIQCLQGHRLPINESPAGLWWGVYTIYGGLTGTVFATFGETLRALQGAL 100
BSNT_05807___ 101 LVSAVCFFLLSVFKVIDRLAKLFTPVVTGVYLLLLVMQLSQPIIKGILGI 150
|:|||.|||.|:||||:|||.||||||||||||||||||||||:||:|||
RBAM_035190__ 101 LLSAVFFFLFSLFKVIERLAVLFTPVVTGVYLLLLVMQLSQPIVKGLLGI 150
BSNT_05807___ 151 GYRQDGVDGLVFGLALVVIAAAFIMTNSNIMFFKQYSILFALFGGWVLFA 200
||.::.|||||||||:||.||.|||:.||:.|.:||:||.:|.|||:|||
RBAM_035190__ 151 GYLKNSVDGLVFGLAMVVTAAMFIMSRSNVTFLRQYAILLSLAGGWILFA 200
BSNT_05807___ 201 AAGAAKPIEMPDRLFQLPSLFPFGTPLFNSGLIITSIFITILLIVNMLAS 250
..||||||::|||:.|||:|||||.|:|:|||||||:|||:|||||||||
RBAM_035190__ 201 VFGAAKPIQIPDRVIQLPALFPFGKPVFDSGLIITSLFITVLLIVNMLAS 250
BSNT_05807___ 251 MKVVDIAVKKFSKQPDGKHHERHAGFAASFSHLLSGLTGAIAPVPISGAA 300
::||:.|||||.... ||..||.||||||.|||||||:|.||||||||||
RBAM_035190__ 251 IRVVEAAVKKFGGTV-GKRRERPAGFAASISHLLSGLSGGIAPVPISGAA 299
BSNT_05807___ 301 GFIETTKMPSKKPFMLGSILVIVISVIPFFMNTFASLPSPVGFAVNFVVF 350
|||||||:||||||:|||:.|::||:||.|||.|||||||||||||||||
RBAM_035190__ 300 GFIETTKLPSKKPFLLGSVFVVIISMIPLFMNAFASLPSPVGFAVNFVVF 349
BSNT_05807___ 351 SAMGGLAFAEFDSYEKEESKRVRSIIGISLLTGVGIMFVPETALKGLHPV 400
|.|.||||.||||||:||.||:|||||::||||||:|||||:||.|:||:
RBAM_035190__ 350 STMAGLAFTEFDSYEREEQKRIRSIIGLALLTGVGVMFVPESALSGMHPI 399
BSNT_05807___ 401 FISLLSNGLVLGTLAAIAADQFQLWRRRKSDNLVSTENKH 440
.|||||||||||||.|||.|:.||.:::|||||||::...
RBAM_035190__ 400 LISLLSNGLVLGTLLAIAIDRIQLIKKKKSDNLVSSDGGR 439
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