Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05857 and RBAM_035560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:22
# Commandline: needle
# -asequence pep-align/BSNT_05857___thiM.1.9828.seq
# -bsequence pep-align/RBAM_035560___thiM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05857___thiM-RBAM_035560___thiM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05857___thiM-RBAM_035560___thiM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05857___thiM
# 2: RBAM_035560___thiM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 272
# Identity: 186/272 (68.4%)
# Similarity: 211/272 (77.6%)
# Gaps: 19/272 ( 7.0%)
# Score: 914.0
#
#
#=======================================
BSNT_05857___ 1 -------------------MHSITNNVVTNFTANGLLALGASPVMAYAKE 31
:||||||||||||||||||||||||||||.|
RBAM_035560__ 1 MDAQTAAQHLSKVRDQNPLVHSITNNVVTNFTANGLLALGASPVMAYAIE 50
BSNT_05857___ 32 EVADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGA 81
|.||||||||||||||||||..||||||.|||||||:|||||.|||||||
RBAM_035560__ 51 EAADMAKIAGALVLNIGTLSSASVEAMIAAGKSANENGVPVIFDPVGAGA 100
BSNT_05857___ 82 TPFRTESARDIIREVRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDI 131
|||||.||..||:||||:||||||||||:..|..||.||||||||.|||:
RBAM_035560__ 101 TPFRTASASKIIQEVRLSAIRGNAAEIANIAGAPDWKIKGVDAGEAGGDV 150
BSNT_05857___ 132 IRLAQQAAQKLNTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLL 181
::||:.||..|.|||||||:.|||:|.:..|.:|||.|||||||||||||
RBAM_035560__ 151 VQLAKTAASGLKTVIAITGKTDVISDGADTYAVHNGDKLLTKVTGAGCLL 200
BSNT_05857___ 182 TSVVGAFCAVEENPLFAAIVAISSYGVAAQLAAKQTADQGPGSFQIELLN 231
|||:|||||..::.|.||:.|:|.||.||||||..|:.:|||||||||||
RBAM_035560__ 201 TSVIGAFCAAGQDVLQAAVSAVSVYGSAAQLAALDTSHKGPGSFQIELLN 250
BSNT_05857___ 232 KLSTVTEQDVQEWATIERVTVS 253
||::::||:..|.|.||||...
RBAM_035560__ 251 KLASISEQEAAELAAIERVIEK 272
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