Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05868 and RBAM_035650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:23
# Commandline: needle
# -asequence pep-align/BSNT_05868___ywbA.1.9828.seq
# -bsequence pep-align/RBAM_035650___ywbA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05868___ywbA-RBAM_035650___ywbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05868___ywbA-RBAM_035650___ywbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05868___ywbA
# 2: RBAM_035650___ywbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 386/444 (86.9%)
# Similarity: 415/444 (93.5%)
# Gaps: 4/444 ( 0.9%)
# Score: 2015.0
#
#
#=======================================
BSNT_05868___ 1 MSAFTRVMEEKIMPVAGKIAGQRHLSALRDGIILTMPLIIIGSVFLILTS 50
||.|.|||||||||||||:||||||.||||||||||||||||||||||||
RBAM_035650__ 1 MSTFNRVMEEKIMPVAGKVAGQRHLRALRDGIILTMPLIIIGSVFLILTS 50
BSNT_05868___ 51 LPIPGYADFMASVFGNEWADKLGYPVNASFDIMAMIAAFGIAYRLAESYG 100
|||||||||||.:||..|.:||||||||||||||::|||||||||||||.
RBAM_035650__ 51 LPIPGYADFMAGLFGENWVEKLGYPVNASFDIMALVAAFGIAYRLAESYE 100
BSNT_05868___ 101 VDALSAGAISIAAFLLATPFEVPFTPHGSTEPIMVGGGIPITLLGSKGLF 150
|||||:|||::||||||||:::||.|.||...|||||||||:||||||||
RBAM_035650__ 101 VDALSSGAIALAAFLLATPYQIPFIPDGSATEIMVGGGIPISLLGSKGLF 150
BSNT_05868___ 151 VAMLIALFSTEIYRYIIQKNIVFKMPDGVPPAVSKSFVALIPGFIIVFLV 200
|||:||:.|||:||:|||:|||.|||||||||||||||||||||||:.||
RBAM_035650__ 151 VAMIIAMLSTEVYRFIIQRNIVIKMPDGVPPAVSKSFVALIPGFIIITLV 200
BSNT_05868___ 201 WLARLLIEMTPFQSLHNVVGDLLGTPLSILGGSLGGSLIAEFVQMLLWSC 250
|||||.||:|||:|||||||||||||||||||||||||||||||||||||
RBAM_035650__ 201 WLARLFIEITPFKSLHNVVGDLLGTPLSILGGSLGGSLIAEFVQMLLWSC 250
BSNT_05868___ 251 GIHGASIIGGIMAPIWYGAMDANRLAFQAGEALPSIFTTQFFQIWINVGG 300
||||||||||:|:|||||||||||||||||||||||||||||||||||||
RBAM_035650__ 251 GIHGASIIGGVMSPIWYGAMDANRLAFQAGEALPSIFTTQFFQIWINVGG 300
BSNT_05868___ 301 SGATLALVLTMLVRSRSKQMKQLGRLGIGPALFNINEPIIFGMPIVMNPL 350
|||||||||||||||||||||||||||||||:||||||||||||:|||||
RBAM_035650__ 301 SGATLALVLTMLVRSRSKQMKQLGRLGIGPAIFNINEPIIFGMPLVMNPL 350
BSNT_05868___ 351 LIVPFIIAPLLTITATYIGMSTGLVARPAGIAVPWTMPPLISGYLATGGK 400
|||||||||||||||||||||||:||:|||||||||||||||||||||||
RBAM_035650__ 351 LIVPFIIAPLLTITATYIGMSTGMVAKPAGIAVPWTMPPLISGYLATGGK 400
BSNT_05868___ 401 VSGAVMQLVNLLITCAIYYPFFRIWDHQKWREESAVESGG---- 440
:||:||||:|||||..||||||||||.||||||.|.|...
RBAM_035650__ 401 ISGSVMQLINLLITFIIYYPFFRIWDLQKWREERAAEQNVTEET 444
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