Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05887 and RBAM_035690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:24
# Commandline: needle
# -asequence pep-align/BSNT_05887___menA.1.9828.seq
# -bsequence pep-align/RBAM_035690___menA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05887___menA-RBAM_035690___menA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05887___menA-RBAM_035690___menA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05887___menA
# 2: RBAM_035690___menA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity: 267/311 (85.9%)
# Similarity: 278/311 (89.4%)
# Gaps: 17/311 ( 5.5%)
# Score: 1379.0
#
#
#=======================================
BSNT_05887___ 1 -----------------MGQILWQLTRPHTLTASFVPVLLGTVLAMFYVK 33
||:||||||||||||||||||||||||||||||
RBAM_035690__ 1 MNQNNMGGSQKTPEKESMGRILWQLTRPHTLTASFVPVLLGTVLAMFYVK 50
BSNT_05887___ 34 VDLLLFLAMLFSCLWIQIATNLFNEYYDFKRGLDTAESVGIGGAIVRHGM 83
||.||||||||||||||||||||||||||||||||.:|||||||||||||
RBAM_035690__ 51 VDFLLFLAMLFSCLWIQIATNLFNEYYDFKRGLDTEDSVGIGGAIVRHGM 100
BSNT_05887___ 84 KPKTILQLALASYGIAILLGVYICASSSWWLALIGLVGMAIGYLYTGGPL 133
||||||||||.||.||::||||||.|||||||.|||.||.||||||||||
RBAM_035690__ 101 KPKTILQLALGSYAIALVLGVYICMSSSWWLAAIGLAGMLIGYLYTGGPL 150
BSNT_05887___ 134 PIAYTPFGELFSGICMGSVFVLISFFIQTDMINTQSILISIPIAILVGAI 183
|||||||||||||||||||||||||||||..||.||||||||||||||||
RBAM_035690__ 151 PIAYTPFGELFSGICMGSVFVLISFFIQTGRINEQSILISIPIAILVGAI 200
BSNT_05887___ 184 NLSNNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVIT 233
||||||||||||||||||||||||||:|||.:||||||:||||:|||||.
RBAM_035690__ 201 NLSNNIRDIEEDKKGGRKTLAILMGHRGAVMILAASFAIAYIWIVGLVIM 250
BSNT_05887___ 234 GAASPWLFVVFLSVPKPVQAVKGFVQKEMPMNMIVAMKSTAQTNTFFGFL 283
|..|||||:||||||||||||||||:.|||||||:|||||||||||||||
RBAM_035690__ 251 GYTSPWLFLVFLSVPKPVQAVKGFVKNEMPMNMIIAMKSTAQTNTFFGFL 300
BSNT_05887___ 284 LSIGLLISYFR 294
|||||||||||
RBAM_035690__ 301 LSIGLLISYFR 311
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