Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05904 and RBAM_035790

See DNA alignment / Visit BSNT_05904 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:25
# Commandline: needle
#    -asequence pep-align/BSNT_05904.1.9828.seq
#    -bsequence pep-align/RBAM_035790___licB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05904-RBAM_035790___licB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05904-RBAM_035790___licB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05904
# 2: RBAM_035790___licB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      75/102 (73.5%)
# Similarity:    79/102 (77.5%)
# Gaps:          19/102 (18.6%)
# Score: 391.0
# 
#
#=======================================

BSNT_05904         1 -------------------MEKSAQEQGKDYTIWAVSGDSVQNHIDKADV     31
                                        ||||||||||:|.|||||||||..|||||||
RBAM_035790__      1 MNILLVCAAGMSTSLLVTKMEKSAQEQGKEYKIWAVSGDSVNQHIDKADV     50

BSNT_05904        32 LLLGPQVRYMLPQLKKLGESKGVPVDVINTVHYGTCNGAEVLKSAEQLGH     81
                     |||||||||:|||||||||||||||:|||||||||||||||||||||||:
RBAM_035790__     51 LLLGPQVRYLLPQLKKLGESKGVPVEVINTVHYGTCNGAEVLKSAEQLGN    100

BSNT_05904        82 VS     83
                     .|
RBAM_035790__    101 AS    102


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