Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05931 and RBAM_036000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:26
# Commandline: needle
# -asequence pep-align/BSNT_05931___cydB.1.9828.seq
# -bsequence pep-align/RBAM_036000___cydB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05931___cydB-RBAM_036000___cydB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05931___cydB-RBAM_036000___cydB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05931___cydB
# 2: RBAM_036000___cydB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 283/338 (83.7%)
# Similarity: 311/338 (92.0%)
# Gaps: 0/338 ( 0.0%)
# Score: 1517.0
#
#
#=======================================
BSNT_05931___ 1 MASLHDLWFILVAVLFVGFFFLEGFDFGVGMATRFLGHNELERRVLINTI 50
|.||||||||||:|||||||||||||||||::||||||||||||||:|||
RBAM_036000__ 1 MGSLHDLWFILVSVLFVGFFFLEGFDFGVGISTRFLGHNELERRVLVNTI 50
BSNT_05931___ 51 GPFWDANEVWLLTGAGAIFAAFPNWYATMLSGYYIPFVIVLLALMGRGVA 100
|||||||||||:||.||||||||||||||||||||||:|:||||||||||
RBAM_036000__ 51 GPFWDANEVWLITGTGAIFAAFPNWYATMLSGYYIPFIIILLALMGRGVA 100
BSNT_05931___ 101 FEFRGKVDHLKWVKVWDWVVFFGSLIPPFVLGVLFTTLFRGMPIDADMNI 150
|||||:|::|||||.||||:||||||||||.|::||:||||:|||..|||
RBAM_036000__ 101 FEFRGQVNNLKWVKTWDWVIFFGSLIPPFVFGLIFTSLFRGVPIDGHMNI 150
BSNT_05931___ 151 HAHVSDYINVYSILGGVTVTLLCFQHGLMFITLRTIGDLQNRARKMAQKI 200
||..||.:||||:|||..||||.|.|||||||||||||||.||||||:::
RBAM_036000__ 151 HAGFSDIVNVYSVLGGAAVTLLSFLHGLMFITLRTIGDLQERARKMAKRV 200
BSNT_05931___ 201 MGVVFVAVLAFAALSAYQTDMFTRRGEITIPLAVLIVICFMLAAVFIRKK 250
:||:|:.||||.|:|||.|||||||..||||:.||||||.:||.||:.||
RBAM_036000__ 201 IGVIFLVVLAFFAMSAYDTDMFTRRANITIPVFVLIVICNVLAIVFMSKK 250
BSNT_05931___ 251 KDGWTFGMTGAGLALTVGMIFISLFPRVMVSSLHSAYDLTVANASSGDYS 300
||||.||||||||||||.|||||||||||||||.||||||||||||||||
RBAM_036000__ 251 KDGWAFGMTGAGLALTVAMIFISLFPRVMVSSLKSAYDLTVANASSGDYS 300
BSNT_05931___ 301 LKVMSIAALTLLPFVIGSQIWSYYVFRKRVSHKEPMTY 338
||||:|.|||||||||||||||||||||||||||||||
RBAM_036000__ 301 LKVMTIVALTLLPFVIGSQIWSYYVFRKRVSHKEPMTY 338
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