Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05986 and RBAM_036210
See
DNA alignment /
Visit
BSNT_05986 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:29
# Commandline: needle
# -asequence pep-align/BSNT_05986___yxiO.1.9828.seq
# -bsequence pep-align/RBAM_036210___yxiO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05986___yxiO-RBAM_036210___yxiO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05986___yxiO-RBAM_036210___yxiO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05986___yxiO
# 2: RBAM_036210___yxiO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 439
# Identity: 325/439 (74.0%)
# Similarity: 377/439 (85.9%)
# Gaps: 23/439 ( 5.2%)
# Score: 1711.0
#
#
#=======================================
BSNT_05986___ 1 -----------MMKRFTKQENSWVLYDWANSAYSIVVTTAVFPLFYKSAA 39
:||||:|:|:||:||||||||||:::.|||||||:|:||
RBAM_036210__ 1 MQRTGFWEGACVMKRFSKEESSWMLYDWANSAYSVIIMTAVFPLFFKAAA 50
BSNT_05986___ 40 AESGVSAAQSTAYLGYTIAISTFILAMLGPILGTIADYEGCKKKFFGFFV 89
||:|||||.||||||||||.:|||||||||:|||||||:||||:||.||.
RBAM_036210__ 51 AENGVSAADSTAYLGYTIAAATFILAMLGPVLGTIADYKGCKKRFFAFFF 100
BSNT_05986___ 90 SAGVASTAMLAFIPSEHWLLLLLFYTISAIGFSGANVFYDAFLVDVTPEK 139
..|||.||.||.||.|.|:|||:.||||.|||:|:|||||||||||..::
RBAM_036210__ 101 LIGVAGTAALALIPGESWMLLLICYTISTIGFAGSNVFYDAFLVDVAAKE 150
BSNT_05986___ 140 RMNLVSARGFGLGYIGSTIPFIISIAVILLAQAETIPVSVSAASQLSFFI 189
|||:|||||||||||||||||::||||||.||||.||:|..||.:::|.|
RBAM_036210__ 151 RMNMVSARGFGLGYIGSTIPFLLSIAVILSAQAEVIPLSAQAAGRIAFLI 200
BSNT_05986___ 190 TAAWWGLFTIPMIKHVHQRYYIKREPHIVINSFKRLGQTMKRIRQYRALF 239
||||||||:||::..|.|||||:|||.:||:|||||..|:|:||::||||
RBAM_036210__ 201 TAAWWGLFSIPLLLRVRQRYYIEREPRLVISSFKRLAGTLKQIRKHRALF 250
BSNT_05986___ 240 LFLLAYFFYIDGVGTIITMSTSYGSDLGIGSSSLLIILFVTQVVAAPFSI 289
||||||||||||||||||||||||:||||.:::|||:|||||||||||||
RBAM_036210__ 251 LFLLAYFFYIDGVGTIITMSTSYGADLGISAANLLIVLFVTQVVAAPFSI 300
BSNT_05986___ 290 VYGKLAERFTGKTMLYVGIVIYMIVCVYAYFMKTTIDFWILAMLVATSQG 339
:||:|||||.||||||.||.:|||||.|||||.:..|||:||||||||||
RBAM_036210__ 301 LYGRLAERFKGKTMLYAGIGVYMIVCTYAYFMDSAFDFWVLAMLVATSQG 350
BSNT_05986___ 340 GIQALSRSYFAKLVPKRHANEFFGFYNIFGKFASIMGPLLIAVTAQLTGK 389
||||||||||||||||::|||||||||||||||||:|||||||||||||.
RBAM_036210__ 351 GIQALSRSYFAKLVPKQNANEFFGFYNIFGKFASIIGPLLIAVTAQLTGN 400
BSNT_05986___ 390 SSTAVFSLIILFVIGIVILAFVPEETSTDVSQQQNDLPL 428
||.|||||||||||||.|||||||||:
RBAM_036210__ 401 SSAAVFSLIILFVIGIGILAFVPEETA------------ 427
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.