Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06020 and RBAM_036330

See DNA alignment / Visit BSNT_06020 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:30
# Commandline: needle
#    -asequence pep-align/BSNT_06020___yxxF.1.9828.seq
#    -bsequence pep-align/RBAM_036330___yxxF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06020___yxxF-RBAM_036330___yxxF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06020___yxxF-RBAM_036330___yxxF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06020___yxxF
# 2: RBAM_036330___yxxF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     246/314 (78.3%)
# Similarity:   276/314 (87.9%)
# Gaps:          13/314 ( 4.1%)
# Score: 1267.5
# 
#
#=======================================

BSNT_06020___      1 MMQQDLSITPKQKSTAVIKMVISMVIFGSIGFFSEHTNLPSFELVFVRCL     50
                            :..:|.|.|||||||||||||||||||||||:||.||||||||
RBAM_036330__      1 -------MQAEQTSNAVIKMVISMVIFGSIGFFSEHTNVPSIELVFVRCL     43

BSNT_06020___     51 CATLFLGLCWLASGQYKTEKWSKRDVLQTLACGFFLVFNWVFLFKSFEET    100
                     ||:||||:||..||:|:||:|::|:||||||||||||.||||||||||||
RBAM_036330__     44 CASLFLGVCWFGSGRYRTEQWNRREVLQTLACGFFLVLNWVFLFKSFEET     93

BSNT_06020___    101 SVTIAISVYHLAPVLVLLLGSFLYREKLNVISVSSIIICFLGTALISGIN    150
                     |||||||||||||||||||||.:|||||:::||:||:|||||||||||||
RBAM_036330__     94 SVTIAISVYHLAPVLVLLLGSLIYREKLHMVSVTSIVICFLGTALISGIN    143

BSNT_06020___    151 GSTSLTQLMGSGIIWAVLAALFYAFTTLLGKGIHNLSPYTTTFLQTGLGV    200
                     ||||.:||||||||||||||||||||||.||||::||||..|.|||||||
RBAM_036330__    144 GSTSFSQLMGSGIIWAVLAALFYAFTTLAGKGINSLSPYAVTCLQTGLGV    193

BSNT_06020___    201 IILIPFIHFGAFADLSQGNWIMVVSTGIIHTGIVYLLFFDSLRILSTKFI    250
                     |||:||:.||||:|||..||||:||||||||||||||||||||.|||:||
RBAM_036330__    194 IILLPFVRFGAFSDLSHVNWIMIVSTGIIHTGIVYLLFFDSLRFLSTRFI    243

BSNT_06020___    251 SIIVFLDPAVAIVLDTVFTGFRPDLYQTLGIVLIFAGMALTLVRRQG--K    298
                     |||||||||||||||||||||||||||:||||||||||||:|:|:|.  .
RBAM_036330__    244 SIIVFLDPAVAIVLDTVFTGFRPDLYQSLGIVLIFAGMALSLIRKQKAVP    293

BSNT_06020___    299 ANVAAEGTDIEQMQ    312
                     |...|:.|.|    
RBAM_036330__    294 AETQADSTRI----    303


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