Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06100 and RBAM_036780
See
DNA alignment /
Visit
BSNT_06100 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:35
# Commandline: needle
# -asequence pep-align/BSNT_06100___mmsA.1.9828.seq
# -bsequence pep-align/RBAM_036780___iolA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06100___mmsA-RBAM_036780___iolA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06100___mmsA-RBAM_036780___iolA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06100___mmsA
# 2: RBAM_036780___iolA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 487
# Identity: 446/487 (91.6%)
# Similarity: 478/487 (98.2%)
# Gaps: 0/487 ( 0.0%)
# Score: 2375.0
#
#
#=======================================
BSNT_06100___ 1 MAEIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAA 50
||||||||||||||||||||||||||:|||||||:|||||||:||::||.
RBAM_036780__ 1 MAEIRKLKNYINGEWVESKTDQYEDVINPATKEVMCQVPISTREDVEYAV 50
BSNT_06100___ 51 QTAAEAFETWSKVAVPRRARILFNFQQLLSQHKEELAHLITIENGKNTKE 100
::|:|||:||||.|||||||||||:||||.|:|||||.|||:||||||.|
RBAM_036780__ 51 RSASEAFQTWSKTAVPRRARILFNYQQLLQQNKEELARLITLENGKNTTE 100
BSNT_06100___ 101 ALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036780__ 101 ALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIA 150
BSNT_06100___ 151 PFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKG 200
|||||||||||||||||:||||||||||||||||||||.||||:||||||
RBAM_036780__ 151 PFNFPMMVPCWMFPMAISLGNTFILKPSERTPLLTEKLAELFEQAGLPKG 200
BSNT_06100___ 201 VFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEHLKRVQSL 250
|||||:||||||||:||||:||||||||||||||||:|||||||||||:|
RBAM_036780__ 201 VFNVVHGAHDVVNGVLEHPDIKAISFVGSKPVGEYVFKKGSEHLKRVQAL 250
BSNT_06100___ 251 TGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEF 300
|||||||||||||:||||||||:|||||||||||||||||||||||||||
RBAM_036780__ 251 TGAKNHTIVLNDAHLEDTVTNIIGAAFGSAGERCMACAVVTVEEGIADEF 300
BSNT_06100___ 301 MAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLV 350
|||||||.|||||||||||||||||||||||||||.||||||:||||||:
RBAM_036780__ 301 MAKLQEKAADIKIGNGLDDGVFLGPVIREDNKKRTHSYIEKGIEEGARLL 350
BSNT_06100___ 351 CDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 400
||||||.::|||||||||||||||:||||||||||||||||||||||||:
RBAM_036780__ 351 CDGRENATEDGYFVGPTIFDNVTTDMTIWKDEIFAPVLSVIRVKNLKEAV 400
BSNT_06100___ 401 EIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFS 450
:|||:|||||||||||||:|||||||||||||||||||||||||||||||
RBAM_036780__ 401 DIANQSEFANGACLFTSNANAIRYFRENIDAGMLGINLGVPAPMAFFPFS 450
BSNT_06100___ 451 GWKSSFFGTLHANGKDSVDFYTRKKVVTARFPAPDFN 487
||||||||||||||||||||||||||||||:|:||||
RBAM_036780__ 451 GWKSSFFGTLHANGKDSVDFYTRKKVVTARYPSPDFN 487
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.