Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06114 and RBAM_036820

See DNA alignment / Visit BSNT_06114 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:36
# Commandline: needle
#    -asequence pep-align/BSNT_06114___htpG.1.9828.seq
#    -bsequence pep-align/RBAM_036820___htpG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06114___htpG-RBAM_036820___htpG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06114___htpG-RBAM_036820___htpG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06114___htpG
# 2: RBAM_036820___htpG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 626
# Identity:     550/626 (87.9%)
# Similarity:   597/626 (95.4%)
# Gaps:           0/626 ( 0.0%)
# Score: 2893.0
# 
#
#=======================================

BSNT_06114___      1 MAKKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTD     50
                     |.||:||||||||||||||||||||||||||||||:||||||||||||||
RBAM_036820__      1 MRKKKFKAESKRLLDMMINSIYTQKEIFLRELISNASDAIDKIYYKALTD     50

BSNT_06114___     51 DALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSL    100
                     |:||||:|:|||||.|||:|||||::||||||||||||||||||||||||
RBAM_036820__     51 DSLTFDQDNYYIKVTADKEARTLTVTDTGIGMTKDELEQHLGTIAKSGSL    100

BSNT_06114___    101 AFKKENELKDGHDIIGQFGVGFYAAFMVADVVTVISKALGSEEAYKWESA    150
                     |||:||:.||||||||||||||||||||||.|||.||||||:|||.|||.
RBAM_036820__    101 AFKQENDSKDGHDIIGQFGVGFYAAFMVADKVTVKSKALGSDEAYVWESE    150

BSNT_06114___    151 GADGYTIEPCEKDSVGTDIILKIKENTEDDSYDEFLEEYRLKAIIKKYSD    200
                     ||.||||.||:|:::||:|.|||||||||:|||||||.||:|||:|||||
RBAM_036820__    151 GAAGYTIAPCDKETIGTEITLKIKENTEDESYDEFLENYRIKAIVKKYSD    200

BSNT_06114___    201 FIRYPIKMDTTINKPKEGSENEFEEVQEEQTVNSMVPIWRKNKSELTDED    250
                     ||||||||:.|:||||||||||||||||||||||||||||||||||||||
RBAM_036820__    201 FIRYPIKMEETVNKPKEGSENEFEEVQEEQTVNSMVPIWRKNKSELTDED    250

BSNT_06114___    251 YEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFIPENMPFDYYSKEYEK    300
                     ||.|||||||||||||||||||||||||||:|||||||||||||:||:||
RBAM_036820__    251 YEAFYAEKHYGFDKPLTHVHISVDGAVRYNSILFIPENMPFDYYTKEFEK    300

BSNT_06114___    301 GLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQL    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036820__    301 GLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQL    350

BSNT_06114___    351 KLIAKNISKKIKSELQSLLKKDREKYETFYKSFGRQLKFGVYNDFGANKD    400
                     |||||||:||||:||:||||..|||||:||:|||||||||||||||||||
RBAM_036820__    351 KLIAKNINKKIKAELKSLLKNKREKYESFYESFGRQLKFGVYNDFGANKD    400

BSNT_06114___    401 QLKDLLLFYSSKEKKLVSLDEYVSRMPEEQKYIYYATGDSYDRIEKLPQT    450
                     .||||||||||||||||:||||||||||:|||||||:||||:||||||||
RBAM_036820__    401 VLKDLLLFYSSKEKKLVTLDEYVSRMPEDQKYIYYASGDSYERIEKLPQT    450

BSNT_06114___    451 EMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQK    500
                     |||||||||||||||||||||||||.||:|||||||||.|||||:|||:|
RBAM_036820__    451 EMVADKGYEILYFTEDIDEFAIKMLTSYEEKEFKSVSSADLGIDSDEDEK    500

BSNT_06114___    501 QSEEEENKYKDLFKEMNNILSDKVKNVRISKRLKSHPVCLAADGEVTIEM    550
                     |:|.|||:|||||:.|..||:|||||||.||||||||||.|.||||||||
RBAM_036820__    501 QTEAEENEYKDLFESMKEILADKVKNVRASKRLKSHPVCFATDGEVTIEM    550

BSNT_06114___    551 EKILNAMPDSQNVKAEKVLEINPNHEVFQTLQDAFEQDKEKLSLYTNLLY    600
                     ||:||||||||.||||||||||||||||:||::|..||:|||:|||||||
RBAM_036820__    551 EKVLNAMPDSQQVKAEKVLEINPNHEVFETLKNAHGQDREKLALYTNLLY    600

BSNT_06114___    601 NQALLIEGLPIQDPVEFTNNICKVMV    626
                     |||||||||||.|||||||:||||||
RBAM_036820__    601 NQALLIEGLPIHDPVEFTNDICKVMV    626


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