Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06185 and RBAM_037250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:38
# Commandline: needle
# -asequence pep-align/BSNT_06185___rocD.1.9828.seq
# -bsequence pep-align/RBAM_037250___rocD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06185___rocD-RBAM_037250___rocD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06185___rocD-RBAM_037250___rocD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06185___rocD
# 2: RBAM_037250___rocD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 365/412 (88.6%)
# Similarity: 387/412 (93.9%)
# Gaps: 11/412 ( 2.7%)
# Score: 1923.0
#
#
#=======================================
BSNT_06185___ 1 MLKQKTRGNSNMTALSKSKEIIDQTSHYGANNYHPLPIVISEALGSWVKD 50
|:|.:||:|||.||||||||||||||||||||.|.||||
RBAM_037250__ 1 -----------MSAFTKSQEIISQTSHYGANNYHPLPIVISEAQGVWVKD 39
BSNT_06185___ 51 PEGNEYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGP 100
||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_037250__ 40 PEGNQYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGP 89
BSNT_06185___ 101 FYEKTAKLTGKEMILPMNTGAEAVESAVKAARRWAYEVKGVADNQAEIIA 150
|||||||||||:||||||||||||||||||||||||||||||||||||||
RBAM_037250__ 90 FYEKTAKLTGKDMILPMNTGAEAVESAVKAARRWAYEVKGVADNQAEIIA 139
BSNT_06185___ 151 CVGNFHGRTMLAVSLSSEEEYKRGFGPMLPGIKLIPYGDVEALRQAITPN 200
|:||||||||||||||||:||||||||||||||||||||.||||:|||||
RBAM_037250__ 140 CIGNFHGRTMLAVSLSSEDEYKRGFGPMLPGIKLIPYGDAEALRRAITPN 189
BSNT_06185___ 201 TAAFLFEPIQGEAGIVIPPEGFLQEAAAICKEENVLFIADEIQTGLGRTG 250
||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_037250__ 190 TAAFLFEPIQGEAGIVIPPEGFLQEAAAICKEENVLLIADEIQTGLGRTG 239
BSNT_06185___ 251 KTFACDWDGIVPDMYILGKALGGGVFPISCIAADREILGVFNPGSHGSTF 300
||||.||:.|||||:||||||||||||||||||:|:||||||||||||||
RBAM_037250__ 240 KTFAVDWENIVPDMFILGKALGGGVFPISCIAANRDILGVFNPGSHGSTF 289
BSNT_06185___ 301 GGNPLACAVSIASLEVLEDEKLADRSLELGEYFKSELESIDNPVIKEVRG 350
||||||||||:|||||||:|.||:|||:||.|||.|||.||||:||:|||
RBAM_037250__ 290 GGNPLACAVSLASLEVLEEEGLAERSLQLGRYFKEELEKIDNPIIKDVRG 339
BSNT_06185___ 351 RGLFIGVELTEAARPYCERLKEEGLLCKETHDTVIRFAPPLIISKEDLDW 400
||||||||||||||||||:||.|||||||||||||||||||:||||||||
RBAM_037250__ 340 RGLFIGVELTEAARPYCEKLKGEGLLCKETHDTVIRFAPPLMISKEDLDW 389
BSNT_06185___ 401 AIEKIKHVLQNA 412
||:||.:|||||
RBAM_037250__ 390 AIQKITNVLQNA 401
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