Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00868 and RBAM_037710

See DNA alignment / Visit BSNT_00868 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:36
# Commandline: needle
#    -asequence pep-align/BSNT_00868.1.9828.seq
#    -bsequence pep-align/RBAM_037710.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00868-RBAM_037710.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00868-RBAM_037710.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00868
# 2: RBAM_037710
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     124/310 (40.0%)
# Similarity:   174/310 (56.1%)
# Gaps:          29/310 ( 9.4%)
# Score: 552.5
# 
#
#=======================================

BSNT_00868         1 MEIRHLKTFITIVEKGGFTKAAEYLGYAQSTITSHIKDIEQEIGGPLFNR     50
                     ||||||.||..||:||.:|.||..|||.|||||:||:.:||||||.||..
RBAM_037710        1 MEIRHLITFQAIVDKGSYTGAAAKLGYTQSTITTHIQALEQEIGGALFTY     50

BSNT_00868        51 FGKKMLLTEVGEYLLPYANEMIRISEKVKQIQSNDEPMGNLVIGAPESLT    100
                     ..:::.||.:|..|:|.|.:::...:|:|.:||..|..|.|.|.||||||
RBAM_037710       51 EKRRLKLTPLGRELIPLAEDLLSAHDKIKNMQSIHEVKGVLKIAAPESLT    100

BSNT_00868       101 VYRLPPIIHEFKKLFPKVKITLKSSTCWELKDDLRNGKVDLAFLLEYEQE    150
                     :.||.|||.|:...:|.|.|.|.:.||.:.:.:|.:|:||:||::..|.:
RBAM_037710      101 ISRLGPIIREYSMKYPNVNIILSNGTCGQNQVELVSGRVDIAFMVYPEIQ    150

BSNT_00868       151 EADLYIEKLITEPMILVF---PKQHKLQNTPFDDFYFSSDEVILYTEHGC    197
                     ........|:.|.::||.   ..:|      |||:..|.....:..|.||
RBAM_037710      151 MEKCIHHSLLEERIVLVAGSDAPEH------FDDYQQSGKHFFITNEEGC    194

BSNT_00868       198 SYRTYFEEYMKHQGLVSENTFEFWSVEAIKQCVMCGLGISLLPLITVQKE    247
                     ||||.||.::....:....|.|.||:|||||.||.|||.|:||.|||::|
RBAM_037710      195 SYRTMFERFLVKYDISHLQTMELWSIEAIKQTVMSGLGFSVLPYITVKEE    244

BSNT_00868       248 LKENKLSGLIMDE--TRIITQVAYHKKRWNSLAMAEFINIV------KKH    289
                     :|..||..|...|  .|:.:.:...||:|...|...|:::|      |  
RBAM_037710      245 VKAGKLKILQQSEPFERLYSHMLVKKKKWQLPAAEAFVSLVLESFGDK--    292

BSNT_00868       290 AELWKRTQTL    299
                               
RBAM_037710      292 ----------    292


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