Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06243 and RBAM_037730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence pep-align/BSNT_06243.1.9828.seq
# -bsequence pep-align/RBAM_037730___yybF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06243-RBAM_037730___yybF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06243-RBAM_037730___yybF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06243
# 2: RBAM_037730___yybF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity: 84/408 (20.6%)
# Similarity: 122/408 (29.9%)
# Gaps: 217/408 (53.2%)
# Score: 396.0
#
#
#=======================================
BSNT_06243 0 -------------------------------------------------- 0
RBAM_037730__ 1 MTYIRRGTLQFKKVNFALFAGGFCTFAILWGTQPLLPDIANDFHLSPAVS 50
BSNT_06243 0 -------------------------------------------------- 0
RBAM_037730__ 51 SLSQSAATIALAISLVFAGFLSEMYGRKQIMGVSLFAASILAVLTGFVSD 100
BSNT_06243 0 -------------------------------------------------- 0
RBAM_037730__ 101 FQLLVVCRALQGAALAGLPAAAMAYLAEEIEPDSLGMAMGLYISGNSIGG 150
BSNT_06243 0 -------------------------------------------------- 0
RBAM_037730__ 151 MTGRIISGFLTDSFSWHSALLTIGLISLLASIIFWTILPVSSHFTPRTYK 200
BSNT_06243 1 -----MSLIGHLRDRKLFSLFLIVFLLLGSNVALFNYIVYVLLGPPYSLN 45
.|.....|......|.:|.|||....|:|:|||.:.|:.|||||:
RBAM_037730__ 201 RNDIFTSFYRQYRMPGFGCLLIIGFLLEAGFVSLYNYIGFQLMKPPYSLS 250
BSNT_06243 46 KAFSSWIFIVMIVGIFSSSFIGRMVDRYGYPKILVMNIFIVIAGALFTIN 95
:....:||:|.:||.|||:::|.:.|:||..|||..::.||:.|...|::
RBAM_037730__ 251 QTAVGFIFLVYLVGTFSSTWMGMLADKYGKRKILPFSLVIVMIGVCITLS 300
BSNT_06243 96 NMLAVKILGIALFTFGFFGGHSVASSWVGRRALHNKAQASSLYLFFYYAG 145
..:.:.|||:|:||||||.|||::|||||..|:.:||||::||||.||.|
RBAM_037730__ 301 ADIGIMILGVAIFTFGFFAGHSISSSWVGELAVRDKAQAAALYLFSYYVG 350
BSNT_06243 146 SSVFRTIGGLFWSGFHWLGVVGMITFM----LLIALWLSGYLARSAKMPD 191
.|:..|..|.|:..|.|.|:..|||.: ..:::|| |.|.:..| |
RBAM_037730__ 351 GSIGGTASGAFYHQFGWGGIAVMITALSAVSAAVSVWL-GLLTKRKK--D 397
BSNT_06243 192 KSNEKGFN 199
|..
RBAM_037730__ 398 KHQ----- 400
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