Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06271 and RBAM_038000

See DNA alignment / Visit BSNT_06271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:43
# Commandline: needle
#    -asequence pep-align/BSNT_06271___rpsF.1.9828.seq
#    -bsequence pep-align/RBAM_038000___rpsF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06271___rpsF-RBAM_038000___rpsF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06271___rpsF-RBAM_038000___rpsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06271___rpsF
# 2: RBAM_038000___rpsF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      91/95 (95.8%)
# Similarity:    94/95 (98.9%)
# Gaps:           0/95 ( 0.0%)
# Score: 467.0
# 
#
#=======================================

BSNT_06271___      1 MRKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAY     50
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_038000__      1 MKKYEVMYIIRPNIDEESKKAVIERFNNVLTSNGAEITGTKDWGKRRLAY     50

BSNT_06271___     51 EINDFRDGFYQIVNVQSDAAAVQEFDRLAKISDDIIRHIVVKEEE     95
                     ||||||||||||:||||:||||.||||||||||||||||||||||
RBAM_038000__     51 EINDFRDGFYQILNVQSEAAAVAEFDRLAKISDDIIRHIVVKEEE     95


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.