Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06290 and RBAM_038130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:44
# Commandline: needle
# -asequence pep-align/BSNT_06290___jag.1.9828.seq
# -bsequence pep-align/RBAM_038130___jag.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06290___jag-RBAM_038130___jag.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06290___jag-RBAM_038130___jag.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06290___jag
# 2: RBAM_038130___jag
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 141/215 (65.6%)
# Similarity: 164/215 (76.3%)
# Gaps: 9/215 ( 4.2%)
# Score: 688.5
#
#
#=======================================
BSNT_06290___ 1 MRNVTAAGRNVDEAVQSGLQELGLTKDKVEIIIIEEGNKGFLGIFGKKPA 50
|:.|||.||||:||||||||||.||||:|||.:::|..|||||||||:.|
RBAM_038130__ 1 MKKVTATGRNVEEAVQSGLQELQLTKDQVEITVVQEEYKGFLGIFGKRNA 50
BSNT_06290___ 51 IVKLVEKIDPIQQAKLYLQTIAEAIAGKSDVTVQESKKTVRYHITGEKAA 100
||:|.||.:|:.:||.||:.|..:|||.|.:..:|:||||.:||.|||||
RBAM_038130__ 51 IVELEEKKNPVHEAKAYLEEIIHSIAGPSKIVTEENKKTVCFHIKGEKAA 100
BSNT_06290___ 101 LLIGKRGQTLNALETLTQLALNRYPGQYKNVTVDAENYRLKRKETLSQLA 150
|||||||||||||||||||.|||..|||:...|||||||.||:|.|.|||
RBAM_038130__ 101 LLIGKRGQTLNALETLTQLVLNRGSGQYRQAVVDAENYRRKRREILEQLA 150
BSNT_06290___ 151 IKLADQVLKTKKSIQLEPMPSSERKIIHDTLSGYANHQIKTYSMGEGENR 200
.:||.||.||||.:.||||||.|||||||.||.:.| |||:|.|||..|
RBAM_038130__ 151 NRLAKQVSKTKKDVHLEPMPSGERKIIHDALSKHPN--IKTFSTGEGRYR 198
BSNT_06290___ 201 HLVISHKR------- 208
|||||||.
RBAM_038130__ 199 HLVISHKDSRKPKSG 213
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