Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04240 and BL00470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_04240___ytbD.1.5803.seq
# -bsequence dna-align/BL00470___ytbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04240___ytbD-BL00470___ytbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04240___ytbD-BL00470___ytbD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04240___ytbD
# 2: BL00470___ytbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1270
# Identity: 849/1270 (66.9%)
# Similarity: 849/1270 (66.9%)
# Gaps: 113/1270 ( 8.9%)
# Score: 2662.0
#
#
#=======================================
BSNT_04240___ 1 ATGAC-----TTCA-GCCAATAAAAGCA--ATATTCCTGCACTACTGGCT 42
||||| |||| |..||.|||.||| ||||| .||.||..|.||.
BL00470___ytb 1 ATGACCTCTGTTCATGATAAAAAACGCAGTATATT--AGCGCTTTTAGCC 48
BSNT_04240___ 43 TTGGCCGTAAGTGCATTCGCAATAGGGACAACTGAATTTATCAGTGTCGG 92
|||||.|..||.|||||.||.||.||.||.||.|||||.|||||.||.||
BL00470___ytb 49 TTGGCGGCCAGCGCATTTGCCATCGGCACGACCGAATTCATCAGCGTGGG 98
BSNT_04240___ 93 CCTTTTGCCGCTCATTGCTGATGACCTGGATATTCCCGTCACGACAGCAG 142
.|||.||||..|.||||||||.|||.||.|||||.|.||.|||||.||||
BL00470___ytb 99 GCTTCTGCCTTTAATTGCTGAAGACATGAATATTTCGGTGACGACGGCAG 148
BSNT_04240___ 143 GATTGACCGTTTCCCTTTATGCGCTCGGCGTTACATTTGGGGCACCTATA 192
||.|||||||.||..|.||.||.||.|||||.|||.|.||.||||||.|.
BL00470___ytb 149 GACTGACCGTATCATTATACGCACTGGGCGTAACAGTCGGCGCACCTGTT 198
BSNT_04240___ 193 TTAACTTCATTGACCTCAAGCATGTCACGTAAGACACTATTGCTTTGGAT 242
.|.||.||..|.||.||.||.|||.|..|.||..|.||..||||...|||
BL00470___ytb 199 CTGACGTCTGTCACATCCAGTATGCCGAGAAAAGCGCTGCTGCTGGTGAT 248
BSNT_04240___ 243 CATGTTTATTTTTATTGCCGGTAATACGATGGCAGCAACCGCTTCAAGCA 292
.|||.|.||||||||...|||.||...|.|.||.|||...||...|||||
BL00470___ytb 249 TATGCTCATTTTTATGATCGGCAACGGGCTTGCGGCATGTGCCGGAAGCA 298
BSNT_04240___ 293 TCGGGATTTTACTAGCAGCACGTGTGATATCGGCATTTTCGCACGGTGTG 342
||||..|||||.||.|.||.||.|||||.|||||.|||||.||.||.||.
BL00470___ytb 299 TCGGTGTTTTATTAACCGCCCGCGTGATTTCGGCGTTTTCTCATGGCGTA 348
BSNT_04240___ 343 TTTATGTCGATCGGTTCGACAATCGCAGC--GGATATTGTCCCGGAGGAT 390
||||||||.||||||||.||.||.||.|| |..|| |||||||.||||
BL00470___ytb 349 TTTATGTCAATCGGTTCAACGATTGCGGCAAGCCTA--GTCCCGGCGGAT 396
BSNT_04240___ 391 AAAAGGGCTAGCGCGATTTCAATTATGTTTACTGGCCTCACTGTGGCAAC 440
|||||.||..|.|||||.||.||.||||||||.||.||.||..|.||||
BL00470___ytb 397 AAAAGAGCCGGAGCGATATCGATCATGTTTACCGGGCTGACGATTGCAA- 445
BSNT_04240___ 441 TG-TAACCGGAGTTCCTTTTGGGACATTTATCGGCCAGCAGTTCGGCTGG 489
|| |.|||||||||||..|.||.||.||..||||.|||||||||||||||
BL00470___ytb 446 TGATTACCGGAGTTCCCATCGGCACGTTCCTCGGTCAGCAGTTCGGCTGG 495
BSNT_04240___ 490 CGTTTCGCCTTTATGGTCATTATCGCCGTCGGAATCA-TTGCTTTCATTA 538
||..|.||.|||..||..||..||||.||||| ..|| |.||.||.||..
BL00470___ytb 496 CGGATTGCTTTTGCGGCGATCGTCGCTGTCGG-CGCACTGGCGTTTATCG 544
BSNT_04240___ 539 CAAATGGCATTCTTGTACCGTCCAAATTACGAAAAG--GGACGAA----- 581
|.||..||.|.|||||.|||..|.|.||.|..|||| |..||||
BL00470___ytb 545 CCAACAGCTTACTTGTTCCGGGCGATTTGCCGAAAGGCGTCCGAACGTCT 594
BSNT_04240___ 582 ---AACAACGATGCGGGATCAATTGAAGCTTGTGACAAACAGCCGGTTAT 628
||.|.| ||.||||||||||||||.||..|.|||.|..
BL00470___ytb 595 TTCAAGAGC----------CAGTTGAAGCTTGTGACCAATGGGCGGCTGC 634
BSNT_04240___ 629 TGCTTTTATTTGTCATTACAGCGCTTGGATACGGAGGAACATTCGTTGTG 678
||||||||||..|||||||.||||||||.||.|||||.|||||.|||||.
BL00470___ytb 635 TGCTTTTATTCATCATTACGGCGCTTGGTTATGGAGGGACATTTGTTGTC 684
BSNT_04240___ 679 TTCACGTATCTGTCTCCCCTGCTTCAGGAAGTAACAGGCTTCAAAGCCGG 728
||.||||||.|.||.||.|||||||||.|.||.||.|||||.||| |.|
BL00470___ytb 685 TTTACGTATTTATCCCCGCTGCTTCAGCATGTGACGGGCTTTAAA--CAG 732
BSNT_04240___ 729 GA--CTGTTGCAGTGATTCTGCTCGGATACGGAATAGCTATTGCTATCGG 776
|| |||||||.||.|||.||||.|..|||||.||.||..|.||..||||
BL00470___ytb 733 GAAGCTGTTGCCGTCATTTTGCTTGCTTACGGCATTGCCGTCGCGCTCGG 782
BSNT_04240___ 777 CAATATGATTGGCGG-AAAGCTGTCAAACCGAAATCCGATTGCCGCTTTA 825
.|||||.||.||.|| ||||| |.|.|||..|||.|||.||.|.||.|||
BL00470___ytb 783 AAATATTATCGGAGGTAAAGC-GGCCAACAAAAAACCGCTTACTGCATTA 831
BSNT_04240___ 826 TTCTATATGTTTATCGTACAAGCAATTGTTCTATTCGTACTGACAT-TTA 874
|||||||||||.||||..||.||...|||.|| |..||| |||
BL00470___ytb 832 TTCTATATGTTCATCGCCCAGGCGGCTGTGCT--------TCTCATCTTA 873
BSNT_04240___ 875 -------CAGCCCCGTATCAAGCAGCAGGGC----TCATTACCATTCTCT 913
|.||.||.|||||.||||| |||| ||.|.|.|||.||
BL00470___ytb 874 ACGGCGGCTGCTCCTTATCAGGCAGC-GGGCTTTATCGTCATCATGCT-- 920
BSNT_04240___ 914 GTATGGGATTGCTGGCCTTTATGAACGTGCCCGGCCTTCAGGTGTATGTC 963
.||||||||..|.|||||.|||||.||.|||||.||.|||...|||||.
BL00470___ytb 921 -GATGGGATTTTTAGCCTTCATGAATGTCCCCGGGCTCCAGTCCTATGTG 969
BSNT_04240___ 964 GTCATGCTGGCTGAGCGTTTTGTCCCGAGTGCAGTTGACGTCGCATCCGC 1013
||.||.||||||||.||.|||||.||..|.||.|||||.||||||||.||
BL00470___ytb 970 GTGATTCTGGCTGAACGGTTTGTTCCAGGGGCGGTTGATGTCGCATCAGC 1019
BSNT_04240___ 1014 GATGAATATCGCTGCCTTTAATGCAGGGATCGCGCTTGGGTC--ATACCT 1061
..|.|||||.||.||.||.||.|..||.||.|||.|.||.|| ||||
BL00470___ytb 1020 TGTCAATATTGCGGCGTTCAACGTCGGTATAGCGATCGGTTCTTATAC-- 1067
BSNT_04240___ 1062 TGGCGGTGTGATCACCGATTCAATCGGATTGATTCATACCGCTTGGATAG 1111
.||.||.|..|||||..|.||.||||||||||||||.||..|.|||.|.|
BL00470___ytb 1068 AGGAGGCGCCATCACACAATCGATCGGATTGATTCACACTCCATGGGTGG 1117
BSNT_04240___ 1112 GCGGATTAATGGTGGTCGGTGCAGTCATTTTAACAGGCTGGAGC----CG 1157
|.|..||.||||||.||||.||.|||.|..|.|||||||||||| ||
BL00470___ytb 1118 GAGCTTTGATGGTGCTCGGCGCCGTCGTGCTGACAGGCTGGAGCAGGGCG 1167
BSNT_04240___ 1158 CT------------------------TGATGGAAAAACGAGATC-GGC-- 1180
|| |||| .||||||.|.||| .||
BL00470___ytb 1168 CTGGAACGAAATGATCAAAAACAAAATGAT-CAAAAACAAAATCAAGCTT 1216
BSNT_04240___ 1181 ---AGGAA------GCCTGA 1191
||||| ||.|||
BL00470___ytb 1217 TAAAGGAAAACTGCGCATGA 1236
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