Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04240 and BL00470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence pep-align/BSNT_04240___ytbD.1.5803.seq
# -bsequence pep-align/BL00470___ytbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04240___ytbD-BL00470___ytbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04240___ytbD-BL00470___ytbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04240___ytbD
# 2: BL00470___ytbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 295/411 (71.8%)
# Similarity: 335/411 (81.5%)
# Gaps: 15/411 ( 3.6%)
# Score: 1482.5
#
#
#=======================================
BSNT_04240___ 1 MTSAN--KSNIPALLALAVSAFAIGTTEFISVGLLPLIADDLDIPVTTAG 48
|||.: |.:|.||||||.||||||||||||||||||||:|::|.|||||
BL00470___ytb 1 MTSVHDKKRSILALLALAASAFAIGTTEFISVGLLPLIAEDMNISVTTAG 50
BSNT_04240___ 49 LTVSLYALGVTFGAPILTSLTSSMSRKTLLLWIMFIFIAGNTMAATASSI 98
|||||||||||.|||:|||:||||.||.|||.||.||:.||.:||.|.||
BL00470___ytb 51 LTVSLYALGVTVGAPVLTSVTSSMPRKALLLVIMLIFMIGNGLAACAGSI 100
BSNT_04240___ 99 GILLAARVISAFSHGVFMSIGSTIAADIVPEDKRASAISIMFTGLTVATV 148
|:||.|||||||||||||||||||||.:||.||||.||||||||||:|.:
BL00470___ytb 101 GVLLTARVISAFSHGVFMSIGSTIAASLVPADKRAGAISIMFTGLTIAMI 150
BSNT_04240___ 149 TGVPFGTFIGQQFGWRFAFMVIIAVGIIAFITNGILVPSKLRKGTKTTMR 198
||||.|||:|||||||.||..|:|||.:|||.|.:|||..|.||.:|:.:
BL00470___ytb 151 TGVPIGTFLGQQFGWRIAFAAIVAVGALAFIANSLLVPGDLPKGVRTSFK 200
BSNT_04240___ 199 DQLKLVTNSRLLLLFVITALGYGGTFVVFTYLSPLLQEVTGFKAGTVAVI 248
.|||||||.||||||:|||||||||||||||||||||.|||||...||||
BL00470___ytb 201 SQLKLVTNGRLLLLFIITALGYGGTFVVFTYLSPLLQHVTGFKQEAVAVI 250
BSNT_04240___ 249 LLGYGIAIAIGNMIGGKLSNRNPIAALFYMFIVQAIVLFVLTFTAPYQAA 298
||.||||:|:||:||||.:|:.|:.|||||||.||.||.:||..||||||
BL00470___ytb 251 LLAYGIAVALGNIIGGKAANKKPLTALFYMFIAQAAVLLILTAAAPYQAA 300
BSNT_04240___ 299 GLITILCMGLLAFMNVPGLQVYVVMLAERFVPSAVDVASAMNIAAFNAGI 348
|.|.|:.||.||||||||||.|||:|||||||.|||||||:||||||.||
BL00470___ytb 301 GFIVIMLMGFLAFMNVPGLQSYVVILAERFVPGAVDVASAVNIAAFNVGI 350
BSNT_04240___ 349 ALGSYLGGVITDSIGLIHTAWIGGLMVVGAVILTGWSRLMEKRDRQEA-- 396
|:|||.||.||.|||||||.|:|.|||:|||:||||||.:|:.|:::.
BL00470___ytb 351 AIGSYTGGAITQSIGLIHTPWVGALMVLGAVVLTGWSRALERNDQKQNDQ 400
BSNT_04240___ 396 ----------- 396
BL00470___ytb 401 KQNQALKENCA 411
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