Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00063 and BL00541
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence dna-align/BSNT_00063___holB.1.5803.seq
# -bsequence dna-align/BL00541___holB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00063___holB-BL00541___holB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00063___holB-BL00541___holB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00063___holB
# 2: BL00541___holB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 998
# Identity: 791/998 (79.3%)
# Similarity: 791/998 (79.3%)
# Gaps: 16/998 ( 1.6%)
# Score: 3145.0
#
#
#=======================================
BSNT_00063___ 1 ATGGCAATATCTTGGAAGGAAATGAACGAGCTTCAGCCCAGAGTGATGAA 50
|||||.|.|.|.||||..||||||.|..||||||||||..|.||.|||||
BL00541___hol 1 ATGGCTACAACCTGGACAGAAATGCAGAAGCTTCAGCCACGGGTTATGAA 50
BSNT_00063___ 51 GCTTTTATATAATAGTATTGAGAAGGACA--GACTATCACACGCTTATTT 98
||||||..|.|||||||| ||||.||.| |.||..|.|||||.|||||
BL00541___hol 51 GCTTTTGCAAAATAGTAT--AGAAAGAAATCGGCTTGCCCACGCCTATTT 98
BSNT_00063___ 99 GTTTGAGGGAAAAAAAGGAACAGGCAAGCTTGATGCCGCGCTGCTTCTTG 148
.|||||.||....|||||.||.|||||..|.||.||.||....|||||.|
BL00541___hol 99 ATTTGAAGGGCGCAAAGGGACGGGCAAATTAGACGCGGCAACCCTTCTGG 148
BSNT_00063___ 149 CAAAAAGCTTCTTTTGTCTGGAGGATGGCGCGGAGCCTTGTGAGAGCTGC 198
||||||||||.|||||.||.||.|||||.||.|||||.||||||...|||
BL00541___hol 149 CAAAAAGCTTTTTTTGCCTTGAAGATGGAGCAGAGCCATGTGAGTCATGC 198
BSNT_00063___ 199 CGAAACTGTAAACGGATAGAGTCAGGGAACCATCCTGATCTCCATCTTGT 248
.|.|||||..|.|||||.||.||.||.||||||||.||..|.||..|.||
BL00541___hol 199 AGGAACTGCCAGCGGATTGAATCTGGAAACCATCCGGACGTACACGTCGT 248
BSNT_00063___ 249 TCAGCCTGATGGCTTATCAATCAAAAAGGCGCAAATTCAAGCGCTCCAAG 298
.||.||.||.|||.|.||.||.|||||||..|||||.||.|||||.||.|
BL00541___hol 249 CCATCCGGACGGCCTTTCCATTAAAAAGGGACAAATCCAGGCGCTTCAGG 298
BSNT_00063___ 299 AAGAGTTTTCTAAGACAGGACTTGAATCGCATAAAAAGCTGTATATTATT 348
||||||||||||||||.||..|.|||||||||||||||||||||||||||
BL00541___hol 299 AAGAGTTTTCTAAGACCGGTTTGGAATCGCATAAAAAGCTGTATATTATT 348
BSNT_00063___ 349 TCGCACGCAGATCAAATGACAGCAAATGCGGCGAACAGCCTGCTGAAATT 398
||.||.||.|||||||||||.|..|||||||||||||||||.||.||.||
BL00541___hol 349 TCCCATGCGGATCAAATGACGGTCAATGCGGCGAACAGCCTTCTAAAGTT 398
BSNT_00063___ 399 TTTAGAAGAACCGAACAAAGACACAATGGCCGTCCTCATCACTGAGCAGC 448
||||||.|||||||.||..||.|||||.||.||.||..|.||.||.||||
BL00541___hol 399 TTTAGAGGAACCGAGCAGCGATACAATCGCTGTTCTTTTAACGGAACAGC 448
BSNT_00063___ 449 CCCAAAGGTTATTGGATACCATCATTTCAAGATGCCA------AACCCTT 492
|.||||..||..|.|||||.|||||.||.|||||||| |.||
BL00541___hol 449 CGCAAAAATTGCTCGATACGATCATATCGAGATGCCAGGTTTTATCC--- 495
BSNT_00063___ 493 CCTTTTCAGCCTTTGCAACCGAAAGCAATTGAAGATAGACTGATCGAACA 542
||||||.|..||||.||..||.|.||||||.|...||||.||.||||
BL00541___hol 496 ---TTTCAGTCGCTGCAGCCCGAATCGATTGAAAAGGAACTGGTCAAACA 542
BSNT_00063___ 543 GGACGTCTCGCCTCATATGGCAAGGCTTCTGGCCAACATGACCAATAATG 592
.||.|||||.||..||||.|||...|||.||.|.||.||||||||.|||.
BL00541___hol 543 AGAGGTCTCACCGAATATTGCAGCCCTTTTGTCGAATATGACCAACAATT 592
BSNT_00063___ 593 TAGCAGAAGCAGTCGAATTAAGTCGAAATGATGAGTTTGCAGAGTCTAGA 642
||.|.|||||..|||||||.||||||||||||.|||||||||||||..||
BL00541___hol 593 TATCGGAAGCGCTCGAATTGAGTCGAAATGATCAGTTTGCAGAGTCGCGA 642
BSNT_00063___ 643 GCGAAAGTGATAAAATTGTATGAAGTCCTACACCAGCGGAAAGGACATGC 692
|||||||||||||||||||||||||||.||||||||||.|||||||||||
BL00541___hol 643 GCGAAAGTGATAAAATTGTATGAAGTCTTACACCAGCGAAAAGGACATGC 692
BSNT_00063___ 693 TTTTTTCTTTATTCAAGATCAATGGATGCCCTTTTTCAAAGAAAAAACCC 742
||||||||.||||||||||||.|||||||||||||||||.||.|||..||
BL00541___hol 693 TTTTTTCTATATTCAAGATCAGTGGATGCCCTTTTTCAAGGAGAAAGACC 742
BSNT_00063___ 743 ATCAAGAAATGGGTCTTGATATGCTCTTATTGATATATCGTGATGTGTTG 792
|.|||||||||||||||||||||||.|||||.||||||||.||.||||||
BL00541___hol 743 ACCAAGAAATGGGTCTTGATATGCTTTTATTTATATATCGCGACGTGTTG 792
BSNT_00063___ 793 TCCATCCAAATAGGAAATGAAGATAAATTGATTTATCAAGACTTATTCCA 842
|||||.||..|.|||.|||||||||||.|..|.|.|||.|||||||||||
BL00541___hol 793 TCCATTCAGTTGGGACATGAAGATAAAATACTATTTCAGGACTTATTCCA 842
BSNT_00063___ 843 ATCAATAAAACAGCATGCGCTACAATCAACACAACAAAGCGTTACGAATC 892
||||.||||||||||||||||.|||.|||||||||||||.||.||.||.|
BL00541___hol 843 ATCATTAAAACAGCATGCGCTGCAAACAACACAACAAAGAGTGACAAACC 892
BSNT_00063___ 893 AGATACTTGCTGTTTTAGAAGCAAAGAAACGGCTTCATTCCAATGTGAAT 942
|||||||||||||||||||||||||.|||||||||.||||||||||||||
BL00541___hol 893 AGATACTTGCTGTTTTAGAAGCAAAAAAACGGCTTTATTCCAATGTGAAT 942
BSNT_00063___ 943 GTACAAGGATTAATGGAGCACTTGGTGTTAATGTTGCAGGAGGGATAA 990
|..|||||||||||||||||||||||.||||||.||||||||||||||
BL00541___hol 943 GCTCAAGGATTAATGGAGCACTTGGTTTTAATGCTGCAGGAGGGATAA 990
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