Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00063 and BL00541

See DNA alignment / Visit BSNT_00063 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence pep-align/BSNT_00063___holB.1.5803.seq
#    -bsequence pep-align/BL00541___holB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00063___holB-BL00541___holB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00063___holB-BL00541___holB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00063___holB
# 2: BL00541___holB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     276/329 (83.9%)
# Similarity:   310/329 (94.2%)
# Gaps:           0/329 ( 0.0%)
# Score: 1458.0
# 
#
#=======================================

BSNT_00063___      1 MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLA     50
                     ||.:|.||.:|||||||||.||||::||:|||||||:|||||||||.|||
BL00541___hol      1 MATTWTEMQKLQPRVMKLLQNSIERNRLAHAYLFEGRKGTGKLDAATLLA     50

BSNT_00063___     51 KSFFCLEDGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQE    100
                     |||||||||||||||||||:|||||||||:|:|.||||||||.|||||||
BL00541___hol     51 KSFFCLEDGAEPCESCRNCQRIESGNHPDVHVVHPDGLSIKKGQIQALQE    100

BSNT_00063___    101 EFSKTGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQP    150
                     |||||||||||||||||||||||.|||||||||||||:.||:|||:||||
BL00541___hol    101 EFSKTGLESHKKLYIISHADQMTVNAANSLLKFLEEPSSDTIAVLLTEQP    150

BSNT_00063___    151 QRLLDTIISRCQTLPFQPLQPKAIEDRLIEQDVSPHMARLLANMTNNVAE    200
                     |:||||||||||.|.||.|||::||..|::|:|||::|.||:|||||::|
BL00541___hol    151 QKLLDTIISRCQVLSFQSLQPESIEKELVKQEVSPNIAALLSNMTNNLSE    200

BSNT_00063___    201 AVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWMPFFKEKTHQE    250
                     |:||||||:||||||||||||||||||||||||:||||||||||||.|||
BL00541___hol    201 ALELSRNDQFAESRAKVIKLYEVLHQRKGHAFFYIQDQWMPFFKEKDHQE    250

BSNT_00063___    251 MGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQIL    300
                     |||||||.|||||||||:|:|||:::||||||:||||||:|||.||||||
BL00541___hol    251 MGLDMLLFIYRDVLSIQLGHEDKILFQDLFQSLKQHALQTTQQRVTNQIL    300

BSNT_00063___    301 AVLEAKKRLHSNVNVQGLMEHLVLMLQEG    329
                     |||||||||:||||.||||||||||||||
BL00541___hol    301 AVLEAKKRLYSNVNAQGLMEHLVLMLQEG    329


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