Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05931 and BL00924
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:01
# Commandline: needle
# -asequence dna-align/BSNT_05931___cydB.1.5803.seq
# -bsequence dna-align/BL00924___cydB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05931___cydB-BL00924___cydB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05931___cydB-BL00924___cydB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05931___cydB
# 2: BL00924___cydB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1048
# Identity: 740/1048 (70.6%)
# Similarity: 740/1048 (70.6%)
# Gaps: 62/1048 ( 5.9%)
# Score: 2485.5
#
#
#=======================================
BSNT_05931___ 1 ATGGCATCTCTTCATGATCTTTGGTTTATACTCGTTGCTGTATTGTTTGT 50
||||.|||||||.||||..|||||||||||.|.||.|||||..||||..|
BL00924___cyd 1 ATGGTATCTCTTAATGAATTTTGGTTTATATTAGTCGCTGTGCTGTTCAT 50
BSNT_05931___ 51 AGGATTCTTCTTTTTGGAGGGCTTTGATTTCGGGGTCGGCATGGCGACCC 100
.||.||.||||||.|.|||||||||||||||||.|||||.||||||||.|
BL00924___cyd 51 CGGTTTTTTCTTTCTTGAGGGCTTTGATTTCGGCGTCGGAATGGCGACGC 100
BSNT_05931___ 101 GTTTTCTTGGCCATAATGAATTAGAACGCAGAGTGCTGATCAACACGATC 150
|.|||||.||.|..||.||..|.|||||.||.|||.|||||||.||||||
BL00924___cyd 101 GGTTTCTCGGGCGCAACGATCTTGAACGGAGGGTGATGATCAATACGATC 150
BSNT_05931___ 151 GGGCCGTTCTGGGACGCGAATGAAGTGTGGCTTTTGACTGGCGCAGGCGC 200
||.||.||||||||.||.||||||||.|||||..||||.||.|.||||||
BL00924___cyd 151 GGTCCTTTCTGGGATGCAAATGAAGTCTGGCTGCTGACCGGGGGAGGCGC 200
BSNT_05931___ 201 CATTTTCGCGGCATTCCCAAACTGGTATGCAACGATGCTGAGCGGTTATT 250
.||||||||.||.||.||.|||||||||||.||||||.|.|||||.||||
BL00924___cyd 201 GATTTTCGCCGCTTTTCCGAACTGGTATGCCACGATGTTCAGCGGATATT 250
BSNT_05931___ 251 ACATTCCGTTTGTCATAGTGCTGCTTGCGTTAATGGGCCGCGGGGTCGCG 300
||||||||||||||.|.||.||.|||||.||.||.|||||||||||||||
BL00924___cyd 251 ACATTCCGTTTGTCTTTGTTCTTCTTGCATTGATCGGCCGCGGGGTCGCG 300
BSNT_05931___ 301 TTTGAGTTCCGCGGCAAGGTGGA----TCATTTAAAATGGGTAAAGGTT- 345
|||||.||..|.||.||.||.|| .| ||||||| |||..|
BL00924___cyd 301 TTTGAATTTAGAGGAAAAGTCGAAACCGC----AAAATGG---AAGAATA 343
BSNT_05931___ 346 --TGGGACTGGGTCGTTTTCTTCGGCAG---TCTGATTCCTCCGTTTGTG 390
|||||.||||||||.||.|||||||| |||| ||.||||||.||
BL00924___cyd 344 CATGGGATTGGGTCGTATTTTTCGGCAGCATTCTG---CCGCCGTTTTTG 390
BSNT_05931___ 391 CTTGGTGTGCTGTTCACGA-CATTATTCCGCGGGATGCCGATTGATGCCG 439
.|.|||||..||||..||| || |..|.|||||.||||||||||||||||
BL00924___cyd 391 TTCGGTGTATTGTTTGCGAGCA-TCCTGCGCGGCATGCCGATTGATGCCG 439
BSNT_05931___ 440 ACATGAACATTCACGCACATGTATCTGATTATATCAATGTATATTCTAT- 488
|.|||||..|.|||||...|.|..|.||||||.|.||.||.|||||..|
BL00924___cyd 440 ATATGAATCTGCACGCCGGTTTTACCGATTATGTGAACGTCTATTCCGTG 489
BSNT_05931___ 489 ACTTGGCGGTGTGACGGTAACACTTCTTTGCTTCCAGCATGGATTAATGT 538
|| .||.||.||..|.||.||.|||||.|||.|.|.|||.||..|.||.|
BL00924___cyd 490 AC-AGGGGGAGTCGCCGTTACGCTTCTCTGCCTGCTGCACGGCCTGATCT 538
BSNT_05931___ 539 TTATCACGCTGCGTACGATTGGTGATTTGCAAAACCGCGCCCGGAAAA-- 586
||||.||..||.|.|||...|..|||||| ||||.||||..||
BL00924___cyd 539 TTATTACATTGAGAACGGAAGCCGATTTG------CGCGACCGGGCAAGA 582
BSNT_05931___ 587 ----TGGCGCAAAAGATAATGGGTGTT----GTTTTTGTAGCGGTTCTTG 628
|||| ||||| ||...||.|| |||||.|..|||.||.|||
BL00924___cyd 583 CAGCTGGC-CAAAA---AAGTCGTATTCGCCGTTTTGGCGGCGCTTGTTG 628
BSNT_05931___ 629 CCTTCGCGG------CCCTTTCTGCGTATCAGACAGACATGTTTACACGC 672
||||.|..| ||.|||.|| |.||.|||.||||.||..||
BL00924___cyd 629 CCTTTGTTGCATTATCCATTTTTG------AAACGGACTTGTTCACGGGC 672
BSNT_05931___ 673 CGCGGCGAGATTACCATTCCGCTCGCTGTTTTGATTGTCATCTGCTTTAT 722
.|.||..|..|.||.||.|||||.||.|.|.||||||||.|.||||.|.|
BL00924___cyd 673 AGGGGGCATGTGACGATACCGCTTGCGGCTCTGATTGTCGTTTGCTATGT 722
BSNT_05931___ 723 GCTCGCGGCTGTATTTATTCGTAAGAAAAA--AGACGGCTGGACATTTGG 770
|||..||...||.||||| |.||.||||| .||||||||||||||||.
BL00924___cyd 723 GCTGTCGATCGTGTTTAT--GAAACAAAAACGCGACGGCTGGACATTTGC 770
BSNT_05931___ 771 GATGACAGGCGCTGGTCTGGCGCTGACCGTGGGAATGATCTTTATTTCCC 820
.|||||.|||||.||..|.||.||.||.||||..|.|||.||.|.|.|.|
BL00924___cyd 771 CATGACGGGCGCAGGGATCGCTCTTACAGTGGCGACGATTTTCACTGCGC 820
BSNT_05931___ 821 TATTCCCTCGCGTAATGGTCAGCTCGCTTCATAGCGCATACGATTTAACA 870
|.|||||.|||||.|||.||||||||.|..|.||||||||.||.|||||.
BL00924___cyd 821 TGTTCCCGCGCGTCATGATCAGCTCGGTGAAAAGCGCATATGACTTAACC 870
BSNT_05931___ 871 GTAGCTAACGCTTCTTCCGGAGATTATTCGCTTAAA-GTCATGTCAATTG 919
||...|||.|||||.||.||.||.||||| .||||| ||.|||.|.||.|
BL00924___cyd 871 GTTTATAATGCTTCATCAGGCGACTATTC-TTTAAAGGTTATGACGATCG 919
BSNT_05931___ 920 CAGCATTAACGCTATTGCCGTTCGTCATCGGCAGCCAGATCTGGAGCTAT 969
..||..|..|.||..|.||||||||..|.|||...||||||||||||||.
BL00924___cyd 920 TCGCGCTGGCACTGCTTCCGTTCGTGCTGGGCTATCAGATCTGGAGCTAC 969
BSNT_05931___ 970 TATGTCTTCCGGAAGCGCGTCAGCCATAAGGAGCCTATGACTTATTAA 1017
|||||.||..|.||.||.||||||...||||||||.||||.|||||||
BL00924___cyd 970 TATGTTTTTAGAAAACGGGTCAGCAGCAAGGAGCCAATGATTTATTAA 1017
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