Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05931 and BL00924
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence pep-align/BSNT_05931___cydB.1.5803.seq
# -bsequence pep-align/BL00924___cydB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05931___cydB-BL00924___cydB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05931___cydB-BL00924___cydB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05931___cydB
# 2: BL00924___cydB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 251/338 (74.3%)
# Similarity: 295/338 (87.3%)
# Gaps: 0/338 ( 0.0%)
# Score: 1379.0
#
#
#=======================================
BSNT_05931___ 1 MASLHDLWFILVAVLFVGFFFLEGFDFGVGMATRFLGHNELERRVLINTI 50
|.||::.|||||||||:||||||||||||||||||||.|:|||||:||||
BL00924___cyd 1 MVSLNEFWFILVAVLFIGFFFLEGFDFGVGMATRFLGRNDLERRVMINTI 50
BSNT_05931___ 51 GPFWDANEVWLLTGAGAIFAAFPNWYATMLSGYYIPFVIVLLALMGRGVA 100
||||||||||||||.||||||||||||||.||||||||.|||||:|||||
BL00924___cyd 51 GPFWDANEVWLLTGGGAIFAAFPNWYATMFSGYYIPFVFVLLALIGRGVA 100
BSNT_05931___ 101 FEFRGKVDHLKWVKVWDWVVFFGSLIPPFVLGVLFTTLFRGMPIDADMNI 150
|||||||:..||...|||||||||::|||:.||||.::.||||||||||:
BL00924___cyd 101 FEFRGKVETAKWKNTWDWVVFFGSILPPFLFGVLFASILRGMPIDADMNL 150
BSNT_05931___ 151 HAHVSDYINVYSILGGVTVTLLCFQHGLMFITLRTIGDLQNRARKMAQKI 200
||..:||:||||:.|||.|||||..|||:||||||..||::|||::|:|:
BL00924___cyd 151 HAGFTDYVNVYSVTGGVAVTLLCLLHGLIFITLRTEADLRDRARQLAKKV 200
BSNT_05931___ 201 MGVVFVAVLAFAALSAYQTDMFTRRGEITIPLAVLIVICFMLAAVFIRKK 250
:..|..|::||.|||.::||:||.||.:|||||.|||:|::|:.||:::|
BL00924___cyd 201 VFAVLAALVAFVALSIFETDLFTGRGHVTIPLAALIVVCYVLSIVFMKQK 250
BSNT_05931___ 251 KDGWTFGMTGAGLALTVGMIFISLFPRVMVSSLHSAYDLTVANASSGDYS 300
:|||||.|||||:||||..||.:||||||:||:.|||||||.||||||||
BL00924___cyd 251 RDGWTFAMTGAGIALTVATIFTALFPRVMISSVKSAYDLTVYNASSGDYS 300
BSNT_05931___ 301 LKVMSIAALTLLPFVIGSQIWSYYVFRKRVSHKEPMTY 338
||||:|.||.|||||:|.|||||||||||||.||||.|
BL00924___cyd 301 LKVMTIVALALLPFVLGYQIWSYYVFRKRVSSKEPMIY 338
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